Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F002003045.1_202017-02-02] 1,951 sequences; 39,922,873 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq250 147 1e-29 seq641 134 9e-26 seq1072 113 3e-19 seq186 102 5e-16 >seq250 Length=164446 Score = 147 bits (162), Expect = 1e-29 Identities = 166/220 (75%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 |||||||||||| ||||||||||| || |||||| | ||||||||| | ||||| Sbjct 133706 ACGAAGACGGAGAACAAGATGAAGAGTCGATTCTTTTTGGATATTATAATCCGAAAGAGT 133647 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | | |||||| || |||||||||||||| |||||||||||||| |||||||| || || Sbjct 133646 GCGGCCATCTTCTAGCTGCTTTCCAGCAAAGATAAGACGTTGTTGGTCAGGAGGGATACC 133587 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAA 480729 ||||| || ||||||||| || ||| ||||| ||||||| | | | | ||| Sbjct 133586 CTCCTTATCCTGAATCTTTGCCTTCACATTGTCAATGGTATCAGACGACTCCACCTCCAA 133527 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||| || || || ||||| | |||||| || || || || Sbjct 133526 -GGTGATGGTCTTTCCGGTCAAAGTCTTGACAAAGATCTG 133488 Score = 95.1 bits (104), Expect = 8e-14 Identities = 111/150 (74%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 480565 CAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTGTTATCTTCAA 480624 |||||||||| ||| ||||| || ||||| |||| || || | ||| || | Sbjct 133920 CAAGATGAAGGGTAGACTCTTTCTGAATGTTATAGTCAGAAAGCGTACGACCATCCTCCA 133861 Query 480625 GTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAA 480684 |||||||||||||| || | ||| ||||| || |||||||| ||||| ||||| |||| Sbjct 133860 ACTGCTTTCCAGCAAAGATCAAACGCTGTTGGTCGGGAGGAATGCCTTCTTTGTCCTGAA 133801 Query 480685 TCTTTTGTTTGACAGCTTCAATAGTATCAG 480714 ||||| |||||| || ||||| |||| Sbjct 133800 TCTTTGCCTTGACATTGTCGATAGTGTCAG 133771 >seq641 Length=219978 Score = 134 bits (148), Expect = 9e-26 Identities = 449/696 (65%), Gaps = 2/696 (0%) Strand=Plus/Minus Query 475487 CGTCTTAGAACTGCTTGTGAACGTGCTAAGCGAGCTCTTTCTTCTGCTACTCAAACTACT 475546 ||||| | || ||||| |||||||| ||||| || | |||||||| |||| || | Sbjct 64980 CGTCTCCGTACCGCTTGCGAACGTGCCAAGCGTACTTTGTCTTCTGCCGCTCAGACCTCG 64921 Query 475547 GTTGAAGTTGATTCTCTTTTTGAAGGAATTGATTATAATACTCTTATTACAAGGGCTAAA 475606 | ||| | ||||| | | ||| || ||||| | | ||| ||||| | || Sbjct 64920 ATCGAAATCGATTCCTTGTATGAGGGTATTGACTTCTACACTTCCCTTACACGTGCCCGT 64861 Query 475607 TTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTTGAACAAGTTCTC 475666 || || || | || || || || | | || | || || || || | || || Sbjct 64860 TTCGAGGAACTCTGCCAAGACCTTTTCCGTAGCACTCTCGATCCTGTCGAGAAGGTCCTT 64801 Query 475667 AGAGATTCTAAACTTGACAAATCACAAGTCCATGAAATTGTTCTTGTAGGAGGTTCAACA 475726 | ||||| || |||| || | | || || ||||| || ||||| || |||||||| Sbjct 64800 CGCGATTCCAAGATTGATAAGGCCAATGTGCACGAAATCGTCCTTGTCGGCGGTTCAACT 64741 Query 475727 AGAATTCCAAAAATAAGAGAAATGCTTTCATCATATTTTAATGGTAAAAAGTTAAATGAA 475786 | ||||| || | | | || | ||||||||||| || || | Sbjct 64740 CGTATTCCTCGTATCGTCAAGCTCGTCTCCGACTTCTTTAATGGTAAGGAGCCCAACAAG 64681 Query 475787 AGTGTAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCA 475846 || | || || ||||| |||||||| || || |||||||||||||| || ||| |||| Sbjct 64680 AGCATTAACCCCGATGAGGCTGTTGCCTACGGTGCTGCTGTCCAAGCTGCGATTCTATCC 64621 Query 475847 GGTCAATCAGACGAGAA-ACTAAATAATATTGTACTTGTTGACGTAACTCCACTTTCATT 475905 ||| | | ||||| ||| | || | | || | ||||| |||| || || | Sbjct 64620 GGTGACACTTCTGAGAAGACT-CAGGATCTACTTCTCCTCGACGTCTCTCCCCTCTCCCT 64562 Query 475906 AGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTATCCC 475965 ||| ||||||| | ||| || | ||||| || || | | || || || |||| Sbjct 64561 CGGTATTGAAACTGCTGGTGGTGTGATGACCGCACTCATCAAGCGTAACACCACTGTCCC 64502 Query 475966 ATGCAAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCA 476025 || || || || || || ||||| | ||||| ||| | ||| |||||| Sbjct 64501 GACTAAGAAGTCTGAAACCTTCTCAACTTACGCCGATAACCAACCTGGTGTGCTCATCCA 64442 Query 476026 AATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAATCT 476085 | |||| || |||||| | |||||| || || ||| ||||| | || | || Sbjct 64441 AGTCTTCGAGGGTGAACGTGCTCGCACTAAGGACAACAACCTCCTTGGGAAATTCGAGCT 64382 Query 476086 TGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGA 476145 | ||||| || ||||||||| | || || |||||||| || || || || || || || Sbjct 64381 TTCTGGTATCCCACCTGCTCCCCGTGGTGTACCTCAAATCGAGGTCACCTTCGACATCGA 64322 Query 476146 TGCAAATGGTATTCTTAATGTTACTGCTTGTGATAA 476181 ||| || ||||| | |||||| |||| |||||| Sbjct 64321 TGCCAACGGTATCTTGAATGTTTCTGCCGCTGATAA 64286 Score = 109 bits (120), Expect = 4e-18 Identities = 159/222 (72%), Gaps = 2/222 (1%) Strand=Plus/Minus Query 474656 TCACCGGAACAAATTTCTTCAATGGTTTTAGCCAAAATGAAACAAACCGCGAGCTCATAT 474715 ||||| ||| |||| ||||| ||||| | |||||||||| |||| || ||| Sbjct 65476 TCACCTGAAGAAATATCTTCGATGGTCCTCCTCAAAATGAAAGAAACTGCCGAAGCATTC 65417 Query 474716 CTTGG-ACAAGAAGTAACTGATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCA 474774 || || || | | | || | |||| | || ||||| || ||||| ||||| ||||| Sbjct 65416 CTCGGCACCACTA-TCACCAACTCAGTCGTGACCGTTCCCGCGTATTTCAATGACTCTCA 65358 Query 474775 ACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAA 474834 |||||| ||||| || || || |||| || | || | ||||| | ||||||||||| Sbjct 65357 ACGTCAGGCAACCAAGGACGCCGGAACCATATCCGGAATGAATGTCCTCCGTATTATTAA 65298 Query 474835 TGAACCAACAGCAGCCGCACTTGCTTATGGTCTTGATAAGAA 474876 |||||||| || || || |||||||||| || || || || Sbjct 65297 CGAACCAACTGCCGCGGCGATTGCTTATGGCCTCGACAAAAA 65256 Score = 89.7 bits (98), Expect = 3e-12 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 474355 TTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAAGTAGAAATAATTGCCAATGACCAAGG 474414 |||||| ||||| | ||| |||||||| | | ||| ||||| ||||||||||||||||| Sbjct 65888 TTACAGGTGTGTCGGTGTGTGGCAAAACGATCGAGTTGAAATTATTGCCAATGACCAAGG 65829 Query 474415 TAATAGAACAACACCATCATATGTTTCTTTTACTGAAACTGAACATCTTATTGGAGATGC 474474 ||| |||| || || || ||||| | || || || || | |||||| || ||||| Sbjct 65828 TAACCGAACGACGCCTTCCTATGTCGCCTTCACCGACGGAGAGCGTCTTATCGGTGATGC 65769 Query 474475 TGCTAAATATCAAG 474488 || || | |||| Sbjct 65768 CGCAAAGAACCAAG 65755 >seq1072 Length=303801 Score = 113 bits (124), Expect = 3e-19 Identities = 158/219 (72%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 480552 CGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTT 480611 |||||||| || ||||| || || || ||||| || ||| ||||||| || || Sbjct 211040 CGAAGACGAAGGACAAGGTGGAGGGTTGACTCTTTCTGAATATTGTAATCAGAAAGCGTG 211099 Query 480612 CTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCT 480671 | ||| || | ||||| ||||||||||| ||||||||||| ||||| ||||| ||| Sbjct 211100 CGACCATCCTCCAACTGCTTGCCAGCAAAAATGAGACGTTGTTGGTCAGGCGGAATACCT 211159 Query 480672 TCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAG 480730 |||||||| || || || || ||| |||||||| |||| | | || ||||| Sbjct 211160 TCCTTGTCCTGGATTTTCGCCTTAACATTGTCAATAGTGTCAGACGACTCAA-CCTCAAG 211218 Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || || || ||||| ||||| ||||| || || Sbjct 211219 AGTGATCGTCTTTCCCGTGAGTGTCTTGACGAAGATCTG 211257 >seq186 Length=69704 Score = 102 bits (112), Expect = 5e-16 Identities = 107/141 (76%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 474737 GCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCG 474796 || || || || || || || || || ||||| | ||||||||||| || ||||| || Sbjct 31357 GCTGTTATCACGGTCCCTGCCTACTTCAATGACGCCCAACGTCAAGCCACGAAAGACGCT 31298 Query 474797 GGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTT 474856 || ||||| |||||| ||||| | ||| | || |||||||| || || |||||| | Sbjct 31297 GGTCAGATTGCTGGTCTTGATGTTCTTCGTGTCATCAATGAACCTACGGCTGCCGCATTG 31238 Query 474857 GCTTATGGTCTTGATAAGAAT 474877 || ||||||||||| |||||| Sbjct 31237 GCCTATGGTCTTGACAAGAAT 31217 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268095512143748