Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F002003045.1_202017-02-02] 1,951 sequences; 39,922,873 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq51 102 1e-16 seq338 82.4 9e-11 >seq51 Length=295103 Score = 102 bits (112), Expect = 1e-16 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 ||||| | ||| ||||||||||||| | || || ||||| || || ||||| |||| Sbjct 220175 CCACAACATATGATCATGCGGGTCGCTGTTGGGATACACGGAGACGATATTGAGCATGTC 220234 Query 75272 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 75330 ||| | |||||| || |||||| | | ||| |||| ||| || || || || ||||| Sbjct 220235 TTGCAAACATACAACCTCATGTCCGAGCGATAT-TTCACTCATGCCACTCCCACTCTCTT 220293 Query 75331 CAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 75390 |||||| ||||| || || || |||||| ||||||||| | || || || || Sbjct 220294 CAATGCCGGTACCCCTTCGCCTCAAATGTCCTCATGCTTCCTTGTTTGCATGAAAGATGA 220353 Query 75391 CTCAATCAACGGTATCTA 75408 || ||| | |||||||| Sbjct 220354 TTCTATCGAAGGTATCTA 220371 >seq338 Length=27447 Score = 82.4 bits (90), Expect = 9e-11 Identities = 132/190 (69%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 75221 ATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTCTTGGAGACA 75280 ||||||||||| || || || || || || || || || ||||| ||| | |||| Sbjct 3560 ATGTTCATGCGTGTGGCTATTGGAATACATGGAGATGATATTGAACGTGTTCTACAGACC 3501 Query 75281 TACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCTGGT 75340 || | ||||| | | | |||||||| || ||||||||||| |||||||| || Sbjct 3500 TATAATCTAATGTCGAACCGATTCTTCATTCATGCGACACCAACCCTTTTCAATGCCGGG 3441 Query 75341 ACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATCAAC 75400 || | | | || ||||| ||||||| | || ||| ||||| ||||| ||| | Sbjct 3440 ACCACTTCAGCTCAAATGTCGTCTTGCTTCTTGATGTCCATGAAGGACGACTCCATCGAT 3381 Query 75401 GGTATCTATG 75410 ||||| |||| Sbjct 3380 GGTATTTATG 3371 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596555051158880