Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lentinula_20edodes_20[genbank_20GCA_5F002003045.1_202017-02-02]
1,951 sequences; 39,922,873 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq35 93.3 5e-13
>seq35
Length=211330
Score = 93.3 bits (102), Expect = 5e-13
Identities = 128/179 (72%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750
||||| | ||| ||| ||| ||| ||| |||||||||||||| || | |||||||||
Sbjct 160463 GCCTTTGAGTAATCGGACACCCGCTTCTCAAAAAAGTTGGTCTTCCCTTGAAGCGAGATC 160404
Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810
| ||||| | ||| ||||| | || ||||| ||| | | ||||| | ||
Sbjct 160403 ATGTCCATAAAGTCGAAGGGGTTCGTCGAGTTGTACAACTTCTTGTTGCCGAGAGCGACG 160344
Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGAT 868869
|| || || ||||| || |||||||| || || ||||| | ||||||||||||||
Sbjct 160343 AGTAGTCGATCGGCAACGAACTCGATATATTGACACATCAATGTCGCGTTCATGCCGAT 160285
Score = 91.5 bits (100), Expect = 2e-12
Identities = 199/293 (68%), Gaps = 5/293 (2%)
Strand=Plus/Minus
Query 869172 TATGCGAACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGC 869231
||||| ||| || || |||||||| | ||||| || || | ||| ||||| | |
Sbjct 160103 TATGCATACCCTCATCACGACTGATGAGCTCGTTTGAGAACGCCAAGCCAGGCATTAATC 160044
Query 869232 CGCGCTTCTTGAGCCAAAAGATGG-CGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACG 869290
| |||||||| | ||||||||||| ||| ||| ||| ||||| || ||||| || ||
Sbjct 160043 CACGCTTCTTCATCCAAAAGATGGACGC-GAAGGAGCCAGAGAAGAAAATGCCTTCAACA 159985
Query 869291 GCGGCAAAGCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGTTGATCCACTTC 869350
|| |||||| | | ||| |||||| | || ||| | || | ||||||| |
Sbjct 159984 GCAGCAAAGGCTACGAGACGCTCGCCGAA--AACCGA-GTGTTCGTCACTGATCCAGCGC 159928
Query 869351 ATCGCCCAGTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGTGG 869410
| ||||| |||||||| | | | | || | || ||||| || ||| |||
Sbjct 159927 AGAGCCCACTCGGCCTTGCGCTTGATGCAAGGAATAGTCTCGATAGCATCAAAAAGGAAA 159868
Query 869411 TCCTTTTCGGCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTC 869463
|| |||| | ||||| |||| || |||||||| || || || || |||||
Sbjct 159867 TCACGTTCGACAGGGTCTTTGATGTATGTGTCGATGAGAAGAGAGTAAGTCTC 159815
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6106979091803467
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |