Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F002003045.1_202017-02-02] 1,951 sequences; 39,922,873 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq250 122 8e-23 seq1072 96.9 3e-15 seq102 93.3 4e-14 >seq250 Length=164446 Score = 122 bits (134), Expect = 8e-23 Identities = 155/212 (73%), Gaps = 1/212 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||||||| | || || | ||||| || || || || || || || || | | Sbjct 133712 GATGCAGATCTTTGTGAAGACATTGACCGGAAAGACGATCACTCTTGAGGTCGAGTCTTC 133771 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || || |||||| || ||||||||||| || |||||||| || Sbjct 133772 TGACACTATCGACAATGTCAAGGCAAAGATTCAGGACAAAGAAGGCATTCCTCCCGACCA 133831 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||| |||||||||||||| || || ||| |||||||| | | | || || ||||| Sbjct 133832 ACAGCGTTTGATCTTTGCTGGAAAGCAGTTGGAGGATGGTCGTACGCTTTCTGACTATAA 133891 Query 24883 CATTCAAAAGGAATCGACACTACA-CTTGGTG 24913 |||||| || || || || || || ||||||| Sbjct 133892 CATTCAGAAAGAGTCTACCCTTCATCTTGGTG 133923 Score = 87.8 bits (96), Expect = 2e-12 Identities = 145/208 (70%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || | ||||| || || || || | || || || | | Sbjct 133485 ATGCAGATCTTTGTCAAGACTTTGACCGGAAAGACCATCACCTTGGAGGTGGAGTCGTCT 133544 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || || |||||| || || || || || || ||||| || ||| Sbjct 133545 GATACCATTGACAATGTGAAGGCAAAGATTCAGGATAAGGAGGGTATCCCTCCTGACCAA 133604 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 |||||| | |||||||| || || ||||| || ||| | | | || |||||||| Sbjct 133605 CAACGTCTTATCTTTGCTGGAAAGCAGCTAGAAGATGGCCGCACTCTTTCGGATTATAAT 133664 Query 24884 ATTCAAAAGGAATCGACACTACA-CTTG 24910 || ||||| |||||||| || || |||| Sbjct 133665 ATCCAAAAAGAATCGACTCTTCATCTTG 133692 >seq1072 Length=303801 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| |||||| |||| || || || || ||||| || || | || || || | | Sbjct 211488 ATGCAAATCTTTGTTAAGACCCTCACGGGCAAAACGATCACTTTGGAGGTCGAGTCTTCA 211429 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||| || || || || || || |||||||||||| Sbjct 211428 GACACGATCGACAACGTGAAGGCCAAGATACAGGATAAGGAGGGCATTCCTCCCGATCAA 211369 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||||| | ||||| ||||| || ||||| || ||| | | | | || || || ||| Sbjct 211368 CAACGACTAATCTTCGCCGGCAAGCAGCTCGAAGATGGACGCACCCTTTCTGACTACAAC 211309 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 ||||| ||||| || || || ||| | || | || | || |||||| Sbjct 211308 ATTCAGAAGGAGTCAACCCTTCACCTTGTTCTTCGTCTACGTGGAGGC 211261 Score = 93.3 bits (102), Expect = 4e-14 Identities = 148/211 (70%), Gaps = 1/211 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || || || || || ||||| || || || || | | Sbjct 211032 ATGCAGATCTTCGTCAAGACCCTCACAGGAAAGACGATTACTCTGGAGGTTGAGTCGTCG 210973 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | ||||| |||||||| ||||| || || || || || || || Sbjct 210972 GACACCATTGACAATGTAAAGGCGAAGATCCAGGACAAGGAGGGCATTCCGCCTGACCAG 210913 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| | || ||||| || || ||| |||||||| | | | || ||||| ||| Sbjct 210912 CAGCGTCTCATTTTTGCTGGCAAGCAGTTGGAGGATGGTCGCACGCTTTCCGATTACAAC 210853 Query 24884 ATTCAAAAGGAATCGACACTACA-CTTGGTG 24913 || || ||||| ||||| || || ||||||| Sbjct 210852 ATCCAGAAGGAGTCGACTCTTCACCTTGGTG 210822 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || || || || || || || || || || || | | Sbjct 211260 ATGCAGATCTTCGTCAAGACACTCACGGGAAAGACGATCACTCTTGAGGTTGAGTCGTCT 211201 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || || | ||| | ||| ||||| ||||| ||||| || || || || || Sbjct 211200 GACACTATTGACAATGTTAAGGCGAAA-ATCCAGGACAAGGAAGGTATTCCGCCTGACCA 211142 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||||||| | || ||||| || || ||| |||||||| | | | || ||||| || Sbjct 211141 ACAACGTCTCATTTTTGCTGGCAAGCAGTTGGAGGATGGTCGCACGCTTTCTGATTACAA 211082 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||| || || || || || ||| | || | || | || ||||| Sbjct 211081 TATTCAGAAAGAGTCAACCCTCCACCTTGTCCTTCGTCTTCGAGGAGG 211034 >seq102 Length=127478 Score = 93.3 bits (102), Expect = 4e-14 Identities = 83/104 (80%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 24809 ATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAAC 24868 || ||||| |||||||||||||||||||| ||||| || || || || ||| ||| Sbjct 68331 ATTCCTCCTGATCAACAACGTTTGATCTTCGCCGGAAAGCAACTCGAAGATGGACGAACT 68390 Query 24869 ATGTCAGATTATAACATTCAAAAGGAATCGACACTACACTTGGT 24912 | || || ||||||||||| ||||||||||| || |||||||| Sbjct 68391 CTTTCCGACTATAACATTCAGAAGGAATCGACGCTCCACTTGGT 68434 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449886628122280