Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F002003045.1_202017-02-02] 1,951 sequences; 39,922,873 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq1072 132 3e-26 seq250 102 5e-17 >seq1072 Length=303801 Score = 132 bits (146), Expect = 3e-26 Identities = 157/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || || ||||||| ||| ||||||||||||||| ||||| || ||| |||| |||| Sbjct 211277 AGAACAAGGTGAAGGGTTGACTCCTTCTGAATGTTGTAGTCAGAAAGGGTGCGTCCATCT 211336 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| ||||||||||| |||||||| || || | || | |||||||| || Sbjct 211337 TCGAGCTGCTTGCCGGCGAAGATTAGTCGTTGTTGATCGGGAGGAATGCCCTCCTTATCC 211396 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | ||| || || ||| | |||| || | |||||| || | || || || Sbjct 211397 TGTATCTTGGCCTTCACGTTGTCGATCGTGTCTGAAGACTCGACCTCCAAAGTGATCGTT 211456 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || |||||||||||||| |||||||| |||||| Sbjct 211457 TTGCCCGTGAGGGTCTTAACAAAGATTTGCATG 211489 Score = 105 bits (116), Expect = 4e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||| | ||| ||| |||||||| || || || || || |||| |||| Sbjct 211049 AGGACAAGGTGGAGGGTTGACTCTTTCTGAATATTGTAATCAGAAAGCGTGCGACCATCC 211108 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 |||| ||||| || || || || || ||||| ||||| |||| | || |||||||| Sbjct 211109 TCCAACTGCTTGCCAGCAAAAATGAGACGTTGTTGGTCAGGCGGAATACCTTCCTTGTCC 211168 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | ||||| || || | || | ||| | ||| || |||| || || ||| Sbjct 211169 TGGATTTTCGCCTTAACATTGTCAATAGTGTCAGACGACTCAACCTCAAGAGTGATCGTC 211228 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 ||||||||||| ||||| || |||||||||||| Sbjct 211229 TTTCCCGTGAGTGTCTTGACGAAGATCTGCATG 211261 >seq250 Length=164446 Score = 102 bits (112), Expect = 5e-17 Identities = 150/210 (71%), Gaps = 8/210 (4%) Strand=Plus/Minus Query 34772 AGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGT 34831 || |||| ||| ||| ||||||||||||||||| || || | || |||| |||| Sbjct 133918 AGATGAAGGGTAGACTCTTTCTGAATGTTATAGTCAGAAAGCGTACGACCATCCTCCAAC 133859 Query 34832 TGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATT 34891 |||||||| || ||||||| || || ||||| | || | || || ||||| | || Sbjct 133858 TGCTTTCCAGCAAAGATCAAACGCTGTTGGTCGGGAGGAATGCCTTCTTTGTCCTGAATC 133799 Query 34892 TTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGTCTT 34947 ||| ||||| || | ||||| ||| | |||||| |||| || || ||||| Sbjct 133798 TTTGCCTTGAC--AT--TGTCGATAGTGTCAGAAGACTCGACCTCAAGAGTGATCGTCTT 133743 Query 34948 TCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||| || | ||||| |||||||||||||| Sbjct 133742 TCCGGTCAATGTCTTCACAAAGATCTGCAT 133713 Score = 93.3 bits (102), Expect = 3e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 || || || || ||||| ||||| || |||| |||| || || |||||||| || ||| Sbjct 133675 TCTTTTTGGATATTATAATCCGAAAGAGTGCGGCCATCTTCTAGCTGCTTTCCAGCAAAG 133616 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 || || ||||| ||||| | || | |||||||| || | || ||| || || Sbjct 133615 ATAAGACGTTGTTGGTCAGGAGGGATACCCTCCTTATCCTGAATCTTTGCCTTCACATTG 133556 Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966 | || | ||| | ||| || || | ||| ||||||||||| || | ||||| ||| Sbjct 133555 TCAATGGTATCAGACGACTCCACCTCCAAGGTGATGGTCTTTCCGGTCAAAGTCTTGACA 133496 Query 34967 AAGATCTGCAT 34977 ||||||||||| Sbjct 133495 AAGATCTGCAT 133485 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325685055737669