Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F002003045.1_202017-02-02] 1,951 sequences; 39,922,873 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq250 105 4e-18 seq1072 98.7 7e-16 >seq250 Length=164446 Score = 105 bits (116), Expect = 4e-18 Identities = 153/212 (72%), Gaps = 3/212 (1%) Strand=Plus/Minus Query 33540 CACCAA-ATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGT 33598 |||||| ||| || || |||||| || ||||| || || || || || || | || | Sbjct 133923 CACCAAGATGAAGGGTAGACTCTTTCTGAATGTTATAGTCAGAAAGCGTACGACCATCCT 133864 Query 33599 CCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGG 33658 |||| || ||||| ||||| ||||||||||| || || | || | ||||||||||| Sbjct 133863 CCAACTGCTTTCCAGCAAAGATCAAACGCTGTTGGTCGGGAGGAATGCCTTCTTTGTCCT 133804 Query 33659 CAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTT 33717 ||| || || | |||| ||| | ||||| || || || |||| |||||||| Sbjct 133803 GAATCTT-TGCCTTGACATTGTCGATAGTGTCAGAAGACTCGACCTCAAGAGTGATCGTC 133745 Query 33718 TTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || || || || || || |||||||||||||| Sbjct 133744 TTTCCGGTCAATGTCTTCACAAAGATCTGCAT 133713 >seq1072 Length=303801 Score = 98.7 bits (108), Expect = 7e-16 Identities = 152/213 (71%), Gaps = 3/213 (1%) Strand=Plus/Plus Query 33540 CACCAAA-TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGT 33598 |||||| || ||||| ||| || || |||||||||||||| || ||||| | || | Sbjct 210822 CACCAAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCGGAAAGCGTGCGACCATCCT 210881 Query 33599 CCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGG 33658 |||| || || || |||||||| | ||||||||| || |||| | || || ||||| Sbjct 210882 CCAACTGCTTGCCAGCAAAAATGAGACGCTGCTGGTCAGGCGGAATGCCCTCCTTGTCCT 210941 Query 33659 CAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTT 33717 || ||| | | |||| ||| | |||||| || || || || | || ||||| Sbjct 210942 GGATCTTC-GCCTTTACATTGTCAATGGTGTCCGACGACTCAACCTCCAGAGTAATCGTC 211000 Query 33718 TTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || ||||| | || || || |||||||||||| Sbjct 211001 TTTCCTGTGAGGGTCTTGACGAAGATCTGCATA 211033 Score = 98.7 bits (108), Expect = 7e-16 Identities = 139/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 33558 CTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAA 33617 |||||| || || |||||||| || || ||||| | || ||||| || || || ||||| Sbjct 211069 CTCTTTCTGAATATTGTAATCAGAAAGCGTGCGACCATCCTCCAACTGCTTGCCAGCAAA 211128 Query 33618 AATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACAT 33677 ||| | ||| || || || |||| | |||||| ||||| |||||| || ||||| Sbjct 211129 AATGAGACGTTGTTGGTCAGGCGGAATACCTTCCTTGTCCTGGATTTTCGCCTT-AACAT 211187 Query 33678 AGTCACG-GTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTA 33736 |||| ||||| || || || |||| |||||||| || || || | || || | Sbjct 211188 TGTCAATAGTGTCAGACGACTCAACCTCAAGAGTGATCGTCTTTCCCGTGAGTGTCTTGA 211247 Query 33737 CAAAGATCTGCAT 33749 | ||||||||||| Sbjct 211248 CGAAGATCTGCAT 211260 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328696184137920