Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F002003045.1_202017-02-02] 1,951 sequences; 39,922,873 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq1072 118 3e-21 seq250 109 1e-18 >seq1072 Length=303801 Score = 118 bits (130), Expect = 3e-21 Identities = 143/195 (73%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || ||||| || ||||||||||||||||| || || ||| ||||| |||| Sbjct 211473 AAGACCCTCACGGGCAAAACGATCACTTTGGAGGTCGAGTCTTCAGACACGATCGACAAC 211414 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||| || || || || || ||| || || ||| |||| |||||| Sbjct 211413 GTGAAGGCCAAGATACAGGATAAGGAGGGCATTCCTCCCGATCAACAACGACTAATCTTC 211354 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 ||||| |||||| | ||||||||| | || | | || |||||| | ||||| ||||| Sbjct 211353 GCCGGCAAGCAGCTCGAAGATGGACGCACCCTTTCTGACTACAACATTCAGAAGGAGTCA 211294 Query 206365 ACTCTTCACCTTGTT 206379 || |||||||||||| Sbjct 211293 ACCCTTCACCTTGTT 211279 Score = 113 bits (124), Expect = 1e-19 Identities = 148/205 (72%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || ||||||||||| ||||| ||| |||| || || || ||| Sbjct 211029 CAGATCTTCGTCAAGACCCTCACAGGAAAGACGATTACTCTGGAGGTTGAGTCGTCGGAC 210970 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | || |||||| ||||| || || || || || ||| ||| ||| || Sbjct 210969 ACCATTGACAATGTAAAGGCGAAGATCCAGGACAAGGAGGGCATTCCGCCTGACCAGCAG 210910 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | || || || || || ||||||||||| ||||| | || | ||||||||||| || Sbjct 210909 CGTCTCATTTTTGCTGGCAAGCAGTTGGAGGATGGTCGCACGCTTTCCGATTACAACATC 210850 Query 206353 CAGAAAGAGTCTACTCTTCACCTTG 206377 ||||| ||||| ||||||||||||| Sbjct 210849 CAGAAGGAGTCGACTCTTCACCTTG 210825 Score = 98.7 bits (108), Expect = 2e-15 Identities = 153/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || ||||| ||||| ||||||||| | || || || |||||| Sbjct 211257 CAGATCTTCGTCAAGACACTCACGGGAAAGACGATCACTCTTGAGGTTGAGTCGTCTGAC 211198 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | || || ||| || || || || || ||||| ||| ||| ||| ||| Sbjct 211197 ACTATTGACAATGTTAAGGCGAAAATCCAGGACAAGGAAGGTATTCCGCCTGACCAACAA 211138 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | || || || || || ||||||||||| ||||| | || | | |||||||| | Sbjct 211137 CGTCTCATTTTTGCTGGCAAGCAGTTGGAGGATGGTCGCACGCTTTCTGATTACAATATT 211078 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCGA 206391 ||||||||||| || || |||||||| | | |||||| Sbjct 211077 CAGAAAGAGTCAACCCTCCACCTTGTCCTTCGTCTTCGA 211039 Score = 93.3 bits (102), Expect = 1e-13 Identities = 77/94 (82%), Gaps = 0/94 (0%) Strand=Plus/Plus Query 204763 AACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTC 204822 |||||||||||| || ||||| ||||| | || ||||||| | || | ||||||||| Sbjct 211279 AACAAGGTGAAGGGTTGACTCCTTCTGAATGTTGTAGTCAGAAAGGGTGCGTCCATCTTC 211338 Query 204823 CAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856 |||||||| ||||||||||| || ||||||||| Sbjct 211339 GAGCTGCTTGCCGGCGAAGATTAGTCGTTGTTGA 211372 >seq250 Length=164446 Score = 109 bits (120), Expect = 1e-18 Identities = 155/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| || || | || ||||| ||||||||| | || || || ||||||| Sbjct 133716 CAGATCTTTGTGAAGACATTGACCGGAAAGACGATCACTCTTGAGGTCGAGTCTTCTGAC 133775 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| ||||||||| || |||||||| ||| || ||| || Sbjct 133776 ACTATCGACAATGTCAAGGCAAAGATTCAGGACAAAGAAGGCATTCCTCCCGACCAACAG 133835 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | | ||||| || |||||||||||||| ||||| | || | | || || ||| | Sbjct 133836 CGTTTGATCTTTGCTGGAAAGCAGTTGGAGGATGGTCGTACGCTTTCTGACTATAACATT 133895 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTC 206389 |||||||||||||| ||||| |||| |||| |||| Sbjct 133896 CAGAAAGAGTCTACCCTTCATCTTG--GTGAGTCTTC 133930 Score = 93.3 bits (102), Expect = 1e-13 Identities = 83/104 (80%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811 ||||| | | |||||| |||||||| || ||||| |||| |||||| || | | ||| Sbjct 133705 CGAAGACGGAGAACAAGATGAAGAGTCGATTCTTTTTGGATATTATAATCCGAAAGAGTG 133646 Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855 | |||||||| ||||||||||| || |||||||| |||||||| Sbjct 133645 CGGCCATCTTCTAGCTGCTTTCCAGCAAAGATAAGACGTTGTTG 133602 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181791257803871