Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lentinula_20edodes_20[genbank_20GCA_5F002003045.1_202017-02-02]
1,951 sequences; 39,922,873 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq35 149 9e-30
seq482 134 2e-25
>seq35
Length=211330
Score = 149 bits (164), Expect = 9e-30
Identities = 367/541 (68%), Gaps = 13/541 (2%)
Strand=Plus/Plus
Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834
||||||| |||||||| || |||||||||||||| || ||||| || || ||| | ||
Sbjct 159559 GATATGGCAAATGTAC-AAGAAGGCCGAGGCCTCTTTCTGGACTGCGGAAGAGATGGATT 159617
Query 1455835 TCGGCGCCGACACGGTCCACTGGGTGT--CGC-TGAGCGACGACGAGCGCCATTTCATCA 1455891
| ||| ||||| ||| ||| ||| ||| || ||||||
Sbjct 159618 TATCAAAAGACCTTCATGACTGGAACAACCGCCTGAATGACAGCGAACGATTCTTCATCT 159677
Query 1455892 AGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGC 1455951
| |||||||| || ||| |||||| |||||||| || |||||| || ||
Sbjct 159678 CCCGTGTCCTCGCGTTCTTT-GCCGCCTCTGATGGCATTGTCAACGAGAATCTTCTCGAA 159736
Query 1455952 CGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCC 1456011
||||| ||| || || || | | ||||| |||| || ||||||||||||||
Sbjct 159737 CGCTTCTCGAACGAAGTACAGGTCGCTGAGGCGCGTTGCTTCTACGGGTTCCAGATTATG 159796
Query 1456012 ATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCG 1456071
|| || ||||| ||||| || || ||||| || || |||||||| ||| |||| |||||
Sbjct 159797 ATGGAGAACATTCACTCCGAGACTTACTCTCTTCTCATCGACACATACATCAAAGACCCT 159856
Query 1456072 GTCGAGAAGGACCACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCC 1456131
||||| || ||| ||| || ||||| || | || | | | | ||||||
Sbjct 159857 GTCGAACGTGATTTCCTTTTTGATGCTATCGAGACTATTCCTTGCATCAAGCGCAAGGCC 159916
Query 1456132 GACTGGGCGATGAAGTGGATCAACAAGGAGGGCCTCGACACTTTGCCGAGCGGCTCGTCG 1456191
|| ||||| || ||||||| | || |||| || | |||||| ||||| |
Sbjct 159917 GAGTGGGCTCTGCGCTGGATCAGTGACGA-ACACTCG-GTTTTCGGCGAGCGTCTCGTAG 159974
Query 1456192 GCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCG-CCATCTTTTGGCTC 1456249
|||||| || || || ||||| || ||||| ||| ||| ||| ||||||||||| |
Sbjct 159975 CCTTTGCTGCTGTTGAAGGCATTTTCTTCTCTGGCTCCTTC-GCGTCCATCTTTTGGATG 160033
Query 1456250 AAGAAGCGCGGCCTCATGCCCGGTCTTCTGCTTTAGC-AACGAATTTATCAGTCGCGACG 1456308
|||||||| || | ||||| || ||| || || | ||||| | |||||||| || |
Sbjct 160034 AAGAAGCGTGGATTAATGCCTGG-CTT-GGCGTTCTCAAACGAGCTCATCAGTCGTGATG 160091
Query 1456309 A 1456309
|
Sbjct 160092 A 160092
>seq482
Length=177074
Score = 134 bits (148), Expect = 2e-25
Identities = 366/550 (67%), Gaps = 23/550 (4%)
Strand=Plus/Minus
Query 1455777 TATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACCTC 1455836
||||| | |||||| | |||| | || || || || |||||| | || ||| | ||||||
Sbjct 124672 TATGGCAGATGTACAAGAAAG-CAGAAGCATCGTTCTGGACCTCGGAAGAGATTGACCTC 124614
Query 1455837 GGCGCCGACACGGTCCACTGGGTGTCGC---TGAGCGACGACGAGCGCCATTTCATCAAG 1455893
|| ||| ||||| || | | | | |||||||| ||||||||||
Sbjct 124613 ACTCATGATCTTGTCGACTGGAACGAGCGATTAAACAATGACGAGCGTCATTTCATCACC 124554
Query 1455894 CACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGCCG 1455953
|||||||| || || ||| |||||| || || |||||| ||| || ||| | ||
Sbjct 124553 CACGTCCTTGCATTCTTT-GCCGCCTCTGACGGTATCGTGAACGAAAATCTGTTGGAGCG 124495
Query 1455954 CTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCCAT 1456013
|||| || || || ||| | ||||| || | ||||| |||||||| || ||
Sbjct 124494 CTTTTCAAACGAAGTGCAAGCAGCTGAGGCGCGCTACTTTTATGGGTTCCAAATAATGAT 124435
Query 1456014 CGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCGGT 1456073
|||||| | || |||||||| ||||| || || ||||| || ||||||||||| | |
Sbjct 124434 GGAAAACGTTCATTCTGAAACTTACTCTCTGCTTATCGATACATACGTCAAGGATC--TT 124377
Query 1456074 CGAGAAGGACCACCTCT-TTCG-CGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCC 1456131
|| | || ||| |||| ||| || || || | |||| | | | || |||
Sbjct 124376 AATCAACGCGCATATCTCTTCGACGCAATAGAAACAATACCGTGCATCAAGCGCAAAGCC 124317
Query 1456132 GACTGGGCGATGAAGTGGA----TCAACAAGGAGGGCCTCGACACTTTGCCGAGCGGCTC 1456187
|||||||| | || |||| | | || || | || ||||| ||| | |
Sbjct 124316 GACTGGGCCCTCAAATGGATATCTGACAAACGAAGCACT------TTTGCAGAGAGATTG 124263
Query 1456188 GTCGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTGG 1456246
|| | || || || |||||||| |||||||| || || ||| |||| || |||
Sbjct 124262 GTGGCATTCGCTGCTGTCGAGGGAATCTTTTTTTCTGGGTCGTTCGCTTCCATTTTCTGG 124203
Query 1456247 CTCAAGAAGCGCGGCCTCATGCCCGGTCT-TCTGCTTTAGCAACGAATTTATCAGTCGCG 1456305
| |||||||||||||| ||||| || || || || | ||||| | ||||| || |
Sbjct 124202 TTAAAGAAGCGCGGCCTGATGCCTGGCCTAACTTATTCA--AACGAGCTCATCAGCCGAG 124145
Query 1456306 ACGAAGTTTT 1456315
| |||| |||
Sbjct 124144 ATGAAGGTTT 124135
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177623022464062
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |