Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F002003045.1_202017-02-02] 1,951 sequences; 39,922,873 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq35 170 3e-37 seq482 161 1e-34 seq109 98.7 1e-15 seq344 91.5 2e-13 seq338 86.0 9e-12 >seq35 Length=211330 Score = 170 bits (188), Expect = 3e-37 Identities = 376/562 (67%), Gaps = 14/562 (2%) Strand=Plus/Minus Query 39616 GCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 39675 |||||||||||| ||| | |||||||| | ||| || | ||||| || || | | Sbjct 160117 GCAGGCGAAGTCGGTATGCATACCCTCATCACGACTGATGAGCTCGTTTGAGAACGCCAA 160058 Query 39676 TCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAA 39735 |||||||||| |||||||| || | |||||| |||| || || || ||||| ||||| Sbjct 160057 GCCAGGCATTAATCCACGCTTCTTCATCCAAAAGATGGACGCGAAGGAGCCAGAGAAGAA 159998 Query 39736 GATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAA--CTTGT-ATCATTATG 39792 |||||||| || || ||||| || || || | ||| ||| || | || || | | Sbjct 159997 AATGCCTTCAACAGCAGCAAAGGCTACGAGACGCTCGCCGAAAACCGAGTGTTCGTCACT 159938 Query 39793 TATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATT 39852 ||||| | | ||||| || || || ||| | ||||| || || || ||||||| Sbjct 159937 GATCCAGCGCAGAGCCCACTCGGCCTTGCGCTTGATGCAAGGAATAGTCTCGATAGCATC 159878 Query 39853 AAAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACAT 39912 ||| || ||| ||| || ||||| | ||||| || || | ||| || | Sbjct 159877 AAAAAGGAAATCACGTTCGACAGGGTCTTTGATGTATGTGTCGATGAGAAGAGAGTAAGT 159818 Query 39913 TTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAAT 39972 || || || ||||| || ||| ||||| || ||||| || || | || |||| | Sbjct 159817 CTCGGAGTGAATGTTCTCCATCATAATCTGGAACCCGTAGAAGCAACGCGCCTCAGCGAC 159758 Query 39973 TTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGC 40032 ||||| || | || | ||| | ||| || || || || |||||| ||||| Sbjct 159757 CTGTACTTCGTTCGAGAAGCGTTCGAGAAGATTCTCGTTGACAATGCCATCAGAGGCGGC 159698 Query 40033 AAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCAAT-------TTAT 40085 ||| || || | ||| | || || || ||| | ||||| | || | Sbjct 159697 AAAGAACGCGAGGACACGGGAGATGAAGAATCGTTC----GCTGTCATTCAGGCGGTTGT 159642 Query 40086 TCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTG 40145 ||||||||| | |||||||||| ||| | ||||| || ||||| || || ||||| | Sbjct 159641 TCCAGTCATGAAGGTCTTTTGATAAATCCATCTCTTCCGCAGTCCAGAAAGAGGCCTCGG 159582 Query 40146 CCTTTTTGTACATGTTCCATAT 40167 |||| |||||||| | |||||| Sbjct 159581 CCTTCTTGTACATTTGCCATAT 159560 >seq482 Length=177074 Score = 161 bits (178), Expect = 1e-34 Identities = 370/556 (67%), Gaps = 6/556 (1%) Strand=Plus/Plus Query 39617 CAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGT 39676 || ||||| || ||||| || ||||||| || || | ||||| ||| | || || Sbjct 124117 CACGCGAAATCGGTATGTAAACCTTCATCTCGGCTGATGAGCTCGTTTGAATAAGTTAGG 124176 Query 39677 CCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAG 39736 |||||||| || || ||||| || | ||| || |||| ||| || || |||||||| ||| Sbjct 124177 CCAGGCATCAGGCCGCGCTTCTTTAACCAGAAAATGGAAGCGAACGACCCAGAAAAAAAG 124236 Query 39737 ATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAA---CTTGTATCATTATGT 39793 || || || || || || ||||| || | ||||||| | || ||| | | | | Sbjct 124237 ATTCCCTCGACAGCAGCGAATGCCACCAATCTCTCTGCAAAAGTGCTTCGTTTGTCAGAT 124296 Query 39794 ATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTA 39853 ||||| || | ||||| || ||||| ||| | || || ||||||||||| || | Sbjct 124297 ATCCATTTGAGGGCCCAGTCGGCTTTGCGCTTGATGCACGGTATTGTTTCTATTGCGTCG 124356 Query 39854 AAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATT 39913 |||||||| || || | ||| || || |||||||| || | |||| || || Sbjct 124357 AAGAGATATGCGCGTTGATTAAGATCCTTGACGTATGTATCGATAAGCAGAGAGTAAGTT 124416 Query 39914 TCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATT 39973 || ||||| | |||||| ||| || || || || ||||| | | || |||| | Sbjct 124417 TCAGAATGAACGTTTTCCATCATTATTTGGAACCCATAAAAGTAGCGCGCCTCAGCTGCT 124476 Query 39974 TGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCA 40033 || || || |||| | ||| || |||||| ||||| || || ||| |||||| Sbjct 124477 TGCACTTCGTTTGAAAAGCGCTCCAACAGATTTTCGTTCACGATACCGTCAGAGGCGGCA 124536 Query 40034 AAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCAAT---TTATTCCAG 40090 || ||||| | || || | || |||| || || | ||| | |||||| Sbjct 124537 AAGAATGCAAGGACGTGGGTGATGAAATGACGCTCGTCATTGTTTAATCGCTCGTTCCAG 124596 Query 40091 TCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTT 40150 || | ||| | | | || | ||||| | ||||| ||||| || ||||| || Sbjct 124597 TCGACAAGATCATGAGTGAGGTCAATCTCTTCCGAGGTCCAGAACGATGCTTCTGCTTTC 124656 Query 40151 TTGTACATGTTCCATA 40166 |||||||| | ||||| Sbjct 124657 TTGTACATCTGCCATA 124672 >seq109 Length=35798 Score = 98.7 bits (108), Expect = 1e-15 Identities = 362/558 (65%), Gaps = 17/558 (3%) Strand=Plus/Plus Query 39613 TAAG-CAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATG 39671 |||| ||||| || || ||| | || ||||| | ||||| | ||| || ||||||| Sbjct 2876 TAAGACAGGCAAATTCGGTATGCATTCCTTCATCGCAGCTAATGAGTTCATTTGAAAATG 2935 Query 39672 TGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAA 39731 | | || ||||| | || || || || | |||||||||| ||||| || |||| | Sbjct 2936 TCAAACCCGGCATCAATCCTCGTTTCTTCATCCAAAATATGCAGGCAAACGACGCAGAGA 2995 Query 39732 AGAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACT---TGTATCAT 39788 | || |||||||| | ||||||||||| || | | |||| | || | | ||| || Sbjct 2996 AAAAAATGCCTTCGATCGCTGCAAATGCTACCAAACGCTCTGCAAAAGTGAATTTATTAT 3055 Query 39789 TATGTATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAG 39848 || ||||||| | ||||| | ||||| | || | || || || ||||| |||| Sbjct 3056 CTTGAATCCACTGAAGCGCCCATTTTGCTTTTCTATTGATGCACGGAATAGTTTCAATAG 3115 Query 39849 CATT-AAAGAGAT--AATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGAC 39905 || || | || || | | | | || | || |||||| | || | || | Sbjct 3116 AGTTGAATAACATCGAACGCTCTGGTGC---ATTTCGAATATATGTTTGAATAAGCAAAG 3172 Query 39906 TATACATTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTT 39965 || |||| ||||| || || || ||| ||||| || || || ||||| | || | Sbjct 3173 AGTAGGTTTCAGAATGAATATTCTCCATCATAATCTGGAAACCATAGAAACACCGCGCCT 3232 Query 39966 CAGTAATTTGTACCTC--TGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATC 40023 | | | |||| || || | ||||| || ||| || || || || ||||| Sbjct 3233 CCGGCACCTGTATTTCGTTGGA-AAAAT-GACAAATCAGATTCTCGTTTACAATACCATC 3290 Query 40024 ACTAGCGGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCAAT-- 40081 || ||||| || |||| || | || || |||| |||| | | | | Sbjct 3291 CGACGCAGCAAAGAACGCCAGGACGCGAGAAACGAAGAATTTCTCATTAGCGTTGAGTTT 3350 Query 40082 -TTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGC 40140 ||||||||||| ||||| || || || | ||| | ||||| | |||||| || |||| Sbjct 3351 GTTATTCCAGTCGTTGATGTCATTCGAAAGATCAATCTCTTCCGATGTCCAGAATGACGA 3410 Query 40141 CTCTGCCTTTTTGTACAT 40158 | || ||||||||||| Sbjct 3411 TTGAGCTTTTTTGTACAT 3428 >seq344 Length=30398 Score = 91.5 bits (100), Expect = 2e-13 Identities = 137/192 (71%), Gaps = 6/192 (3%) Strand=Plus/Minus Query 68402 TTGTACGTAGATAGTACATACCGGTTTTCAGACCTAGACTCCATCCGTAGAAATGCATAC 68461 |||| | ||||| ||||| || ||||||| ||| |||||||| || |||||||||| Sbjct 13318 TTGTTCTCAGATAATACATTCCAGTTTTCAAGCCTTTTCTCCATCCATAAAAATGCATAC 13259 Query 68462 TTGTTAGTTTGGA---ATAACTTGGATCGGCTATATGAATATTCATCGATTGACTTTGAT 68518 ||||||| | || || | |||| ||| | ||||||||||| |||||||| Sbjct 13258 TTGTTAGCT--GACCCAT-AGATGGAGAGGCAAGATGAATATTCAAACTCTGACTTTGGC 13202 Query 68519 CGATGAAAGCTCCTCTATCTGCCGCCATTTTTATAATACTCTTTTGAGGAATTTCCCAAA 68578 |||||| || || | ||| | || | | | ||| | ||||||| ||||||||||| Sbjct 13201 AGATGAACGCGCCACGATCCACGGCAAGGTCCAAAATCGTTTTTTGAGAAATTTCCCAAA 13142 Query 68579 TAGTCTTAAAAA 68590 || ||| ||| Sbjct 13141 CCGTTTTATAAA 13130 >seq338 Length=27447 Score = 86.0 bits (94), Expect = 9e-12 Identities = 108/146 (74%), Gaps = 2/146 (1%) Strand=Plus/Plus Query 69696 AATATCAGAATGCCATGGTTCTAGATATATCGCCAT-GACTCCCGGTCGTTTATTTCCTC 69754 |||||||| |||||| ||||| | || || || || ||| || ||||||||||| || | Sbjct 3092 AATATCAGGATGCCAAGGTTCAACGTAGATAGCGATAGAC-CCTGGTCGTTTATTACCCC 3150 Query 69755 CCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAG 69814 | ||||| | |||| || || || ||| || | ||||| || ||||| ||||||| Sbjct 3151 CTTGATCAACATATCGTGCTGTAGCATCATATACACGAAGCATTGGTATAATGCCATTAG 3210 Query 69815 ATTTACCATTTGTTCCAGAAATATAA 69840 | | ||| ||||| || | |||||| Sbjct 3211 AATAACCGTTTGTACCGGCGATATAA 3236 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686892048011640