Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F002003045.1_202017-02-02] 1,951 sequences; 39,922,873 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq51 129 7e-25 seq338 95.1 1e-14 seq35 87.8 2e-12 >seq51 Length=295103 Score = 129 bits (142), Expect = 7e-25 Identities = 417/638 (65%), Gaps = 21/638 (3%) Strand=Plus/Plus Query 104965 TAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATT 105024 ||| |||||||| | || || ||||| |||||||| || || ||||| | |||| Sbjct 221082 TAACCAAAAGAACCTCGGAGTCATCAAATCATCCAATCTTTGCACTGAAATTGTCGAATA 221141 Query 105025 TACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGT 105084 | ||||| || ||||| ||||| || || || | ||||| || | || | Sbjct 221142 CTCTTCTCCGGATGAAACTGCTGTCTGTAATCTTGCTTCCCTTGCTCTTCCAACCTACAT 221201 Query 105085 ------GGATCCAGA-GACAAAGACATTT---GATTATGAAAAACTCCACGAAGTTACGA 105134 |||| || | |||| |||| |||| | |||||||| || ||||||| Sbjct 221202 AGTGAAGGATGCATCTGGCAAAC-CATTCTACGATTTCCAGAAACTCCATGATGTTACGA 221260 Query 105135 AAACTGTCACCAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGT---TGAGA 105191 |||| ||| | ||||| || | || |||||| | || | |||||| | |||| Sbjct 221261 AAACGGTCGCTTTCAACCTCAATCGCGTCATTGATCGCAACTACTACCCCATCCCTGAG- 221319 Query 105192 CTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGG 105251 || ||| |||||| ||| | ||||||| ||||| |||||||||| |||||||| | Sbjct 221320 --GCCCGTCGATCTAACATGCGTAACCGTCCCATTGGAATCGGTGTTCAAGGTCTCGCTG 221377 Query 105252 ATGTATTCAT-TCTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCG 105310 | | ||||| | ||| | | | ||||| || |||||| |||||| |||| || Sbjct 221378 ACGCCTTCATGGCATTGAAGATGC-CTTTTGACTCGCCCGAAGCCAAGGAACTCAACACG 221436 Query 105311 CGCATATTTGAGACCATGTATCACGCCGCTCTTGAGGCGAGTTCAGAGTTGGCAGAGGTT 105370 || || ||||| || || || | |||| ||||||||||| || |||| || Sbjct 221437 AAGATTTTCGAGACAATTTACCATGGCGCTTGTGAGGCGAGTTGCGAAATGGCGAAGACG 221496 Query 105371 GATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGAT 105430 ||||||||||| || || | |||| ||| ||| |||||| | || || ||| Sbjct 221497 GATGGTCCATACGAGACGTGGATGGGTAGTCCTGCTCAGCAAGGGCAATTGCAGTTCGAT 221556 Query 105431 ATGTGGGAAGGTGAGACCAAGC-TTCACTACGACTGGGAAGCTCTCAAGGAACGCATCAA 105489 | |||| || | ||| | | || || |||||| | | | ||||| |||| Sbjct 221557 CTATGGG-GTGTTACACCTACCGATCTCTGGGACTGGAATACGTTGAAGGAGAGCATTTC 221615 Query 105490 GGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCTCCAATGCCAACAGCCTCCACCGCACA 105549 || | || | | ||| || || | || |||||||| || ||||| || || Sbjct 221616 TAAGTATGGAATGAGGAACTCGCTGCTTACTGCACCAATGCCTACTGCCTCTACAAGTCA 221675 Query 105550 AATCTTGGGTAATAATGAATGCTTTGAACCCTACACGA 105587 || | || || ||||||||||| || ||||||| Sbjct 221676 GATGCTCGGCTTCAACGAATGCTTTGAGCCTTACACGA 221713 Score = 93.3 bits (102), Expect = 5e-14 Identities = 141/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281 ||||| | ||| ||||||| || || | || || || || || || ||||| |||| Sbjct 220175 CCACAACATATGATCATGCGGGTCGCTGTTGGGATACACGGAGACGATATTGAGCATGTC 220234 Query 104282 TTGGAGACATACGACAAGATGTCCCAAGG-TATGTTCATTCACGCAACACCAACCCTCTT 104340 ||| | |||||| || |||||| | | ||| |||| ||| || || || || ||||| Sbjct 220235 TTGCAAACATACAACCTCATGTCCGAGCGATAT-TTCACTCATGCCACTCCCACTCTCTT 220293 Query 104341 CAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 104400 |||||| ||||| || || ||||||||| ||||||||| | || || || || Sbjct 220294 CAATGCCGGTACCCCTTCGCCTCAAATGTCCTCATGCTTCCTTGTTTGCATGAAAGATGA 220353 Query 104401 CTCAATCAACGGTATCTA 104418 || ||| | |||||||| Sbjct 220354 TTCTATCGAAGGTATCTA 220371 >seq338 Length=27447 Score = 95.1 bits (104), Expect = 1e-14 Identities = 135/190 (71%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 104231 ATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTCTTGGAGACA 104290 ||||||||||| ||||| || || || ||||| || || ||||| ||| | |||| Sbjct 3560 ATGTTCATGCGTGTGGCTATTGGAATACATGGAGATGATATTGAACGTGTTCTACAGACC 3501 Query 104291 TACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCTGGT 104350 || | ||||| | | | |||||||| || ||||||||||| |||||||| || Sbjct 3500 TATAATCTAATGTCGAACCGATTCTTCATTCATGCGACACCAACCCTTTTCAATGCCGGG 3441 Query 104351 ACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATCAAC 104410 || | | | |||||||| ||||||| | || ||| ||||| ||||| ||| | Sbjct 3440 ACCACTTCAGCTCAAATGTCGTCTTGCTTCTTGATGTCCATGAAGGACGACTCCATCGAT 3381 Query 104411 GGTATCTATG 104420 ||||| |||| Sbjct 3380 GGTATTTATG 3371 Score = 82.4 bits (90), Expect = 9e-11 Identities = 155/225 (69%), Gaps = 5/225 (2%) Strand=Plus/Minus Query 104513 GGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCG 104572 || ||||| ||| | || |||| ||||| ||||||||||| |||| | | || ||||| Sbjct 3226 GGTACAAACGGTTATTCTAATGGCATTATACCAATGCTTCGTGTATATGATGCTACAGCA 3167 Query 104573 CGCTATGTAAATCAAGCTGGGCGT---CGAAAGGGATCTATCGCAGTCTATCTTGAGCCA 104629 || ||||| |||||| || | ||| || |||||||| |||| |||| || Sbjct 3166 CGATATGTTGATCAAGGGGGTAATAAACGACCAGGGTCTATCGCTATCTACGTTGAACCT 3107 Query 104630 TGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCG 104689 ||||| | ||||| | || | | | ||||| ||||| || | ||||| | Sbjct 3106 TGGCATCCTGATATTTTCGATATAGTCAACTTGCGCAAGAACCATGGCAAGGAGGA-ACT 3048 Query 104690 CGGTGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTT 104733 |||| || ||| | |||| || || |||||||||||||| || Sbjct 3047 TCGTGCTCGTGATTTGTTCTATGCACTATGGATTCCAGATCTGTT 3003 >seq35 Length=211330 Score = 87.8 bits (96), Expect = 2e-12 Identities = 104/136 (76%), Gaps = 4/136 (3%) Strand=Plus/Plus Query 94804 GAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCG-C 94862 ||||| ||| | || ||||| |||||| || || ||||||||||| |||||| ||| | Sbjct 159962 GAGCGTCTCGTAGCCTTTGCTGCTGTTGAAGGCATTTTCTTCTCTGGCTCCTTC-GCGTC 160020 Query 94863 TATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGC-TTCTCCAACGAGCTTA 94921 || | |||| | |||||||| || | ||||| || || || ||||| |||||||| | Sbjct 160021 CATCTTTTGGATGAAGAAGCGTGGATTAATGCCTGG-CTTGGCGTTCTCAAACGAGCTCA 160079 Query 94922 TCTCTCGTGACGAGGG 94937 || |||||| ||||| Sbjct 160080 TCAGTCGTGATGAGGG 160095 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583246575727240