Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F002003045.1_202017-02-02] 1,951 sequences; 39,922,873 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq250 84.2 1e-11 >seq250 Length=164446 Score = 84.2 bits (92), Expect = 1e-11 Identities = 148/212 (70%), Gaps = 3/212 (1%) Strand=Plus/Minus Query 34497 CACCAA-ATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTT 34555 |||||| ||| || || ||| || ||||||||||| || ||||| || || | || | Sbjct 133923 CACCAAGATGAAGGGTAGACTCTTTCTGAATGTTATAGTCAGAAAGCGTACGACCATCCT 133864 Query 34556 CAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTG 34615 | | || || || ||||| || |||||||||||||| || || | || || ||||| Sbjct 133863 CCAACTGCTTTCCAGCAAAGATCAAACGCTGTTGGTCGGGAGGAATGCCTTCTTTGTC-C 133805 Query 34616 TGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTT 34674 ||| |||| || || | || ||||| ||| || || | || ||||| Sbjct 133804 TGAATCTTTGCCTTGACATTGTCGATAGTGTCAGAAGACTCGACCTCAAGAGTGATCGTC 133745 Query 34675 TTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || ||||| || || |||||||| |||||||| Sbjct 133744 TTTCCGGTCAATGTCTTCACAAAGATCTGCAT 133713 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314722116418583