Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F002003045.1_202017-02-02] 1,951 sequences; 39,922,873 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq250 196 1e-44 seq1072 192 1e-43 seq102 86.0 1e-11 >seq250 Length=164446 Score = 196 bits (216), Expect = 1e-44 Identities = 177/223 (79%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | || ||||| |||||||| || ||||||||||| |||||||||| ||| || Sbjct 133706 ACGAAGACGGAGAACAAGATGAAGAGTCGATTCTTTTTGGATATTATAATCCGAAAGAGT 133647 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | |||||||| |||||||| || || |||||||| ||||||||||||||||| | || Sbjct 133646 GCGGCCATCTTCTAGCTGCTTTCCAGCAAAGATAAGACGTTGTTGGTCAGGAGGGATACC 133587 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 ||||| ||||| |||||| ||||| || || ||||| ||||| || ||||| | Sbjct 133586 CTCCTTATCCTGAATCTTTGCCTTCACATTGTCAATGGTATCAGACGACTCCACCTCCAA 133527 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 ||||| |||||||| || | |||||| ||||| | ||||||| Sbjct 133526 GGTGATGGTCTTTCCGGTCAAAGTCTTGACAAAGATCTGCATT 133484 Score = 168 bits (186), Expect = 2e-36 Identities = 162/208 (78%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 210907 CAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCA 210966 |||| ||||| || |||||||| || |||||||| || | ||| || | ||||| |||| Sbjct 133920 CAAGATGAAGGGTAGACTCTTTCTGAATGTTATAGTCAGAAAGCGTACGACCATCCTCCA 133861 Query 210967 GCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGA 211026 |||||| || || ||||| | || |||||||| ||||||| ||||| |||||||| | Sbjct 133860 ACTGCTTTCCAGCAAAGATCAAACGCTGTTGGTCGGGAGGAATGCCTTCTTTGTCCTGAA 133801 Query 211027 TCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTC 211086 ||||| || || || ||||| |||||||| || ||||| |||||||||||||||| Sbjct 133800 TCTTTGCCTTGACATTGTCGATAGTGTCAGAAGACTCGACCTCAAGAGTGATCGTCTTTC 133741 Query 211087 CCGTGAGAGTCTTTACAAACACCTGCAT 211114 | || | ||||| ||||| | |||||| Sbjct 133740 CGGTCAATGTCTTCACAAAGATCTGCAT 133713 >seq1072 Length=303801 Score = 192 bits (212), Expect = 1e-43 Identities = 175/221 (79%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953 ||||| | ||||||||||| || || |||||||| || || || ||||| | ||| || Sbjct 211040 CGAAGACGAAGGACAAGGTGGAGGGTTGACTCTTTCTGAATATTGTAATCAGAAAGCGTG 211099 Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 | ||||| |||| ||||||||| || || || || |||||||||||||| |||| ||| Sbjct 211100 CGACCATCCTCCAACTGCTTGCCAGCAAAAATGAGACGTTGTTGGTCAGGCGGAATACCT 211159 Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073 |||||||||||||| || || || || || || |||||||| |||||||| ||| Sbjct 211160 TCCTTGTCCTGGATTTTCGCCTTAACATTGTCAATAGTGTCAGACGACTCAACCTCAAGA 211219 Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 |||||||||||||||||||| ||||| || || | |||||| Sbjct 211220 GTGATCGTCTTTCCCGTGAGTGTCTTGACGAAGATCTGCAT 211260 Score = 185 bits (204), Expect = 2e-41 Identities = 176/225 (78%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 210890 TCAACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAG 210949 || ||| || | || ||||||||||| || ||||| || || ||||| || || | ||| Sbjct 211264 TCCACGTAGACGAAGAACAAGGTGAAGGGTTGACTCCTTCTGAATGTTGTAGTCAGAAAG 211323 Query 210950 GGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAAC 211009 ||| | ||||||||| ||||||||||| |||||||| || |||||||| || ||||||| Sbjct 211324 GGTGCGTCCATCTTCGAGCTGCTTGCCGGCGAAGATTAGTCGTTGTTGATCGGGAGGAAT 211383 Query 211010 TCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTC 211069 || ||||| ||||| ||||| |||||||| ||||| ||||| || || ||||| Sbjct 211384 GCCCTCCTTATCCTGTATCTTGGCCTTCACGTTGTCGATCGTGTCTGAAGACTCGACCTC 211443 Query 211070 GAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 | ||||||||| || |||||||| ||||| ||||| | ||||| Sbjct 211444 CAAAGTGATCGTTTTGCCCGTGAGGGTCTTAACAAAGATTTGCAT 211488 Score = 178 bits (196), Expect = 3e-39 Identities = 164/208 (79%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 210907 CAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCA 210966 ||||||||||||| ||||| || |||||||| ||||| | ||| || | ||||| |||| Sbjct 210825 CAAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCGGAAAGCGTGCGACCATCCTCCA 210884 Query 210967 GCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGA 211026 ||||||||| || || || || || || |||||||| |||| || ||||||||||||| Sbjct 210885 ACTGCTTGCCAGCAAAAATGAGACGCTGCTGGTCAGGCGGAATGCCCTCCTTGTCCTGGA 210944 Query 211027 TCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTC 211086 |||| || || || || |||||||| || |||||||| ||||| |||||||||| Sbjct 210945 TCTTCGCCTTTACATTGTCAATGGTGTCCGACGACTCAACCTCCAGAGTAATCGTCTTTC 211004 Query 211087 CCGTGAGAGTCTTTACAAACACCTGCAT 211114 | ||||| ||||| || || | |||||| Sbjct 211005 CTGTGAGGGTCTTGACGAAGATCTGCAT 211032 Score = 111 bits (122), Expect = 4e-19 Identities = 94/116 (81%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | ||||| ||||| || |||||||||||||||||||| ||||||| || || Sbjct 211781 ACGAAGACGAAGGACTAGGTGGAGGGTGGACTCTTTTTGGATGTTGTAATCCGAGAGAGT 211840 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAA 211008 | ||| || || || ||||| || ||||| || || ||||||||||| ||||||| Sbjct 211841 TCGTCCGTCCTCAAGTTGCTTTCCAGCGAAAATCAGACGTTGTTGGTCTGGAGGAA 211896 Score = 98.7 bits (108), Expect = 2e-15 Identities = 92/117 (79%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 210890 TCAACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAG 210949 || ||| || | ||||||||||| || ||||| || || || ||||| || || | ||| Sbjct 211492 TCCACGGAGACGAAGGACAAGGTGGAGTGTGGATTCCTTCTGAATGTTGTAGTCGGAAAG 211551 Query 210950 GGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGG 211006 ||| | |||||||| |||||||| || || || ||||| |||||||||||||| || Sbjct 211552 GGTTCGACCATCTTCGAGCTGCTTCCCCGCAAATATAAGACGTTGTTGGTCAGGTGG 211608 Score = 93.3 bits (102), Expect = 1e-13 Identities = 83/104 (80%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 211011 CCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCG 211070 |||||||| || |||||||| || || || ||||| ||||||||| ||||||||| Sbjct 211956 CCTTCCTTATCTTGGATCTTAGCCTTGACATTGTCGATAGTGTCAGAGGACTCAACCTCG 212015 Query 211071 AGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 |||||||| ||||| || ||||| |||||||| || | ||||| Sbjct 212016 AGAGTGATAGTCTTCCCAGTGAGGGTCTTTACGAAGATTTGCAT 212059 >seq102 Length=127478 Score = 86.0 bits (94), Expect = 1e-11 Identities = 83/107 (78%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 211011 CCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCG 211070 |||||||| ||||||||||| || || || ||||||||||| ||| || ||||| Sbjct 68267 CCTTCCTTATCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCCGAGGACTCCACCTCC 68208 Query 211071 AGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 || ||||| ||||| ||||| || ||||| ||||| | ||||| || Sbjct 68207 AGGGTGATTGTCTTACCCGTTAGGGTCTTGACAAAAATTTGCATCTT 68161 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159123024460115