Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F002003045.1_202017-02-02] 1,951 sequences; 39,922,873 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq250 91.5 1e-13 >seq250 Length=164446 Score = 91.5 bits (100), Expect = 1e-13 Identities = 137/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 39094 TCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAAT 39153 |||||||| ||||||||||| | ||| || || | || || ||||| || || ||||| Sbjct 133675 TCTTTTTGGATATTATAATCCGAAAGAGTGCGGCCATCTTCTAGCTGCTTTCCAGCAAAG 133616 Query 39154 ATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTG-TTTGAGCGT 39212 |||||||| || ||||| | || | | ||| || ||| ||| | | || || | | Sbjct 133615 ATAAGACGTTGTTGGTCAGGAGGGATACCCTCCTTATCC-TGAATCTTTGCCTTCACATT 133557 Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | ||||| ||||||||| |||| ||||| | ||||| |||| || || || Sbjct 133556 GTCAATGGTATCAGACGACTCCACCTCCAAGGTGATGGTCTTTCCGGTCAAAGTCTTGAC 133497 Query 39273 AAAGATTTGCAT 39284 |||||| ||||| Sbjct 133496 AAAGATCTGCAT 133485 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429535386345263