Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lentinula_20edodes_20[genbank_20GCA_5F002003045.1_202017-02-02]
1,951 sequences; 39,922,873 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq109 172 5e-38
seq482 159 3e-34
>seq109
Length=35798
Score = 172 bits (190), Expect = 5e-38
Identities = 380/565 (67%), Gaps = 6/565 (1%)
Strand=Plus/Plus
Query 4542 AATAA-ACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAA 4600
||||| ||| ||||| || ||||| ||||| || | |||||| ||||| || |||||
Sbjct 2874 AATAAGACAGGCAAATTCGGTATGCATTCCTTCATCGCAGCTAATGAGTTCATTTGAAAA 2933
Query 4601 CGTTAATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGA 4660
|| || || ||||| || |||| || || | ||||||||| |||||| ||| ||||
Sbjct 2934 TGTCAAACCCGGCATCAATCCTCGTTTCTTCATCCAAAATATGCAGGCAAACGACGCAGA 2993
Query 4661 AAAGAATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTT 4720
|| || |||||||| | || ||||| ||||| || || | || | | ||
Sbjct 2994 GAAAAAAATGCCTTCGATCGCTGCAAATGCTACCAAACGCTCTGCAAAAGTGAATTTATT 3053
Query 4721 GTCTTTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATAT 4780
|||| |||||| | | ||||| || |||||| | || | ||||||||| || | ||
Sbjct 3054 ATCTTGAATCCACTGAAGCGCCCATTTTGCTTTTCTATTGATGCACGGAATAGTTTCAAT 3113
Query 4781 AGCGTTAAATAATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCT 4840
|| ||| ||||| | || || | | ||||||| || | || || |
Sbjct 3114 AGAGTTGAATAACATCGAACGCTCTGGTGCATTTCGAATATATGTTTGAATAAGCAAAGA 3173
Query 4841 ATACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTC 4900
|| |||||||||| ||||| || || |||||| || || || || || | || ||
Sbjct 3174 GTAGGTTTCAGAATGAATATTCTCCATCATAATCTGGAAACCATAGAAACACCGCGCCTC 3233
Query 4901 TGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTT-TCGTTTACTATACCGTCAC 4959
| || || | |||||| |||| | | | | || || |||||||| ||||| ||
Sbjct 3234 CGGCACCTGTATTTCGTTGGAAAAA-TGACAAATCAGATTCTCGTTTACAATACCATCCG 3292
Query 4960 TGGCTGCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAAGTTTTT 5019
|| ||||| ||||||| || |||| | ||| | | || | || || ||||| |
Sbjct 3293 ACGCAGCAAAGAACGCCAGGACGCGAGAAACGAAGAATTTCTCATTAGCGTTGAGTTTGT 3352
Query 5020 T---CCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTT 5076
| ||||| | | || || | | ||||| ||||| ||||| || |||| ||
Sbjct 3353 TATTCCAGTCGTTGATGTCATTCGAAAGATCAATCTCTTCCGATGTCCAGAATGACGATT 3412
Query 5077 CCGCTTTTTTGTACATAGACCAAAT 5101
|||||||||||||| ||||||||
Sbjct 3413 GAGCTTTTTTGTACATTGACCAAAT 3437
>seq482
Length=177074
Score = 159 bits (176), Expect = 3e-34
Identities = 371/553 (67%), Gaps = 11/553 (2%)
Strand=Plus/Plus
Query 4547 ACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAA 4606
|||||| ||||| ||| |||||||| |||| ||| || || ||||| ||| | ||||
Sbjct 124116 ACACGCGAAATCGGTATGTAAACCTTCATCTCGGCTGATGAGCTCGTTTGAATAAGTTAG 124175
Query 4607 TCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAA 4666
|| ||||| | || | ||| || | ||| || || | || || ||||||||||| ||
Sbjct 124176 GCCAGGCATCAGGCCGCGCTTCTTTAACCAGAAAATGGAAGCGAACGACCCAGAAAAAAA 124235
Query 4667 TATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGTCTTT 4726
|| || || || || || || || || |||| | || | ||| ||||||
Sbjct 124236 GATTCCCTCGACAGCAGCGAATGCCACCAATCTCTCTGCAAAAGTGCTTCGTTTGTCAGA 124295
Query 4727 AATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTT 4786
|||||||| | ||||||| ||||| ||| | |||||| ||||| | ||| ||||
Sbjct 124296 TATCCATTTGAGGGCCCAGTCGGCTTTGCGCTTGATGCACGGTATTGTTTCTATTGCGTC 124355
Query 4787 AAATA-ATTTAC---TTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTAT 4842
|| | || | | || || | || |||| | || || || || || || |
Sbjct 124356 GAAGAGATATGCGCGTTGATTAAGAT---CCTTG-ACGTATGTATCGATAAGCAGAGAGT 124411
Query 4843 ACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTG 4902
| |||||||||| | ||||| || || || || || |||||| | | || || |
Sbjct 124412 AAGTTTCAGAATGAACGTTTTCCATCATTATTTGGAACCCATAAAAGTAGCGCGCCTCAG 124471
Query 4903 TTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGG 4962
| |||| |||||||| |||| | || | | |||||||| || ||||||||| ||
Sbjct 124472 CTGCTTGCACTTCGTTTGAAAAGCGCTCCAACAGATTTTCGTTCACGATACCGTCAGAGG 124531
Query 4963 CTGCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCGTCA-GGCTTAA--GTTTTT 5019
| ||||| || || | || || | || || | | |||||| | |||| | | |
Sbjct 124532 CGGCAAAGAATGCAAGGACGTGGGTGATGAAATGACGCTCGTCATTGTTTAATCGCTCGT 124591
Query 5020 TCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCG 5079
|||||| | | ||| | ||| | |||| ||||| ||||| ||||| ||||| |
Sbjct 124592 TCCAGTCGACAAGATCATGAGTGAGGTCAATCTCTTCCGAGGTCCAGAACGATGCTTCTG 124651
Query 5080 CTTTTTTGTACAT 5092
|||| ||||||||
Sbjct 124652 CTTTCTTGTACAT 124664
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427039445694683
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |