Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F002003045.1_202017-02-02] 1,951 sequences; 39,922,873 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq482 145 1e-29 seq109 123 4e-23 seq344 98.7 1e-15 seq338 91.5 2e-13 seq51 89.7 7e-13 >seq482 Length=177074 Score = 145 bits (160), Expect = 1e-29 Identities = 374/561 (67%), Gaps = 14/561 (2%) Strand=Plus/Plus Query 46629 ACATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 46688 ||| || ||||| ||| | |||||||||| || || | ||||| ||| | || || Sbjct 124116 ACACGCGAAATCGGTATGTAAACCTTCATCTCGGCTGATGAGCTCGTTTGAATAAGTTAG 124175 Query 46689 CCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAA 46748 |||||||| || || ||||| || | ||| || || | ||||| || |||||||| || Sbjct 124176 GCCAGGCATCAGGCCGCGCTTCTTTAACCAGAAAATGGAAGCGAACGACCCAGAAAAAAA 124235 Query 46749 TATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTAT---G 46805 || || || ||||| |||||||| || | ||||||| | || || | || || | Sbjct 124236 GATTCCCTCGACAGCAGCGAATGCCACCAATCTCTCTGCAAAAGTG-CTTCGTTTGTCAG 124294 Query 46806 A-ATCCACCTTTGAG--CCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGC 46862 | ||||| |||||| |||| || || || ||| | || || ||||||||||| || Sbjct 124295 ATATCCA--TTTGAGGGCCCAGTCGGCTTTGCGCTTGATGCACGGTATTGTTTCTATTGC 124352 Query 46863 ATTAAAGAGAAAGtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATA 46922 | |||||| | || || | ||| || || |||||||| || | ||| || Sbjct 124353 GTCGAAGAGATATGCGCGTTGATTAAGATCCTTGACGTATGTATCGATAAGCAGAGAGTA 124412 Query 46923 CATTTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGT 46982 |||| ||||||| |||||| || || || || || ||||| | | || |||| Sbjct 124413 AGTTTCAGAATGAACGTTTTCCATCATTATTTGGAACCCATAAAAGTAGCGCGCCTCAGC 124472 Query 46983 AATCTGTACCTCTGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTAGC 47042 || || || | |||| || || ||| ||| || ||||| || || ||| || Sbjct 124473 TGCTTGCACTTCGTTTGAAAAGCGCTCCAACAGATTTTCGTTCACGATACCGTCAGAGGC 124532 Query 47043 AGCAAAAAATGCCAATACATGTTTAATAAAAT---ATTTTTCATCG-GTAGTCAGTTTAT 47098 ||||| ||||| | || || | || |||| | |||| | || || | | | Sbjct 124533 GGCAAAGAATGCAAGGACGTGGGTGATGAAATGACGCTCGTCATTGTTTAATC-GCTCGT 124591 Query 47099 TCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTG 47158 ||||||| | ||| | | | || | ||||| | |||||||| || || |||| Sbjct 124592 TCCAGTCGACAAGATCATGAGTGAGGTCAATCTCTTCCGAGGTCCAGAACGATGCTTCTG 124651 Query 47159 CTTTTTTATACATATTCCATA 47179 |||| || ||||| | ||||| Sbjct 124652 CTTTCTTGTACATCTGCCATA 124672 >seq109 Length=35798 Score = 123 bits (136), Expect = 4e-23 Identities = 363/556 (65%), Gaps = 20/556 (4%) Strand=Plus/Plus Query 46629 ACATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 46688 ||| ||||| || ||| | |||||||| | ||||| | ||| || |||||||| | Sbjct 2880 ACAGGCAAATTCGGTATGCATTCCTTCATCGCAGCTAATGAGTTCATTTGAAAATGTCAA 2939 Query 46689 CCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAA 46748 || ||||| | ||| || || || | ||||||||| || || || |||| || || Sbjct 2940 ACCCGGCATCAATCCTCGTTTCTTCATCCAAAATATGCAGGCAAACGACGCAGAGAAAAA 2999 Query 46749 TATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTAT---G 46805 |||||||| | || || ||||| || | | |||| | || || | ||||| | Sbjct 3000 AATGCCTTCGATCGCTGCAAATGCTACCAAACGCTCTGCAAAAGTGAATTTATTATCTTG 3059 Query 46806 AATCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATT 46865 ||||||| | ||||| | || ||| | || | || || || ||||| |||| || Sbjct 3060 AATCCACTGAAGCGCCCATTTTGCTTTTCTATTGATGCACGGAATAGTTTCAATAGAGTT 3119 Query 46866 AAAGA-----GAAAGtttttttCATCACTATCTTTAACATATGTATCTATTA--AAAGAC 46918 || | ||| | | | | || | || |||||| | || | ||||| Sbjct 3120 GAATAACATCGAACGCTCTGGTGC-----ATTTCGAATATATGTTTGAATAAGCAAAGAG 3174 Query 46919 TATACATTTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTT 46978 || |||| |||||||| || || || ||||| || || || ||||| | || | Sbjct 3175 TAGG--TTTCAGAATGAATATTCTCCATCATAATCTGGAAACCATAGAAACACCGCGCCT 3232 Query 46979 CAGTAATCTGTACCTCTGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCAC 47038 | | | ||||| || | |||| | | || |||||| || || || ||||| Sbjct 3233 CCGGCACCTGTATTTCGTTGGAAAAATGACAAATCAGATTCTCGTTTACAATACCATCCG 3292 Query 47039 TAGCAGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGTAGTCAGTTT-- 47096 |||||||| || |||| || | || || |||| |||| | | ||||| Sbjct 3293 ACGCAGCAAAGAACGCCAGGACGCGAGAAACGAAGAATTTCTCATTAGCGTTGAGTTTGT 3352 Query 47097 -ATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCT 47155 ||||||||| ||||| || || || | ||| | ||||| | |||||||||||||| | Sbjct 3353 TATTCCAGTCGTTGATGTCATTCGAAAGATCAATCTCTTCCGATGTCCAGAATGACGATT 3412 Query 47156 CTGCTTTTTTATACAT 47171 |||||||| ||||| Sbjct 3413 GAGCTTTTTTGTACAT 3428 >seq344 Length=30398 Score = 98.7 bits (108), Expect = 1e-15 Identities = 160/226 (71%), Gaps = 7/226 (3%) Strand=Plus/Minus Query 75373 CAAC-GTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACATACCAGTTT 75431 |||| |||| |||||| || | |||| | |||| | ||||| ||||| ||||||| Sbjct 13351 CAACAGTGATCTGAATAGGCCGTGCAGCTGATCTTGTTCTCAGATAATACATTCCAGTTT 13292 Query 75432 TTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGA---ATAACTCGGAT 75488 | | || |||||||| || |||||||| |||||||| | || ||| | ||| Sbjct 13291 TCAAGCCTTTTCTCCATCCATAAAAATGCATACTTGTTAGCT--GACCCATAGAT-GGAG 13235 Query 75489 CGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCA 75548 ||| | ||||||||||| ||||||||| |||||| || || | ||| | || | Sbjct 13234 AGGCAAGATGAATATTCAAACTCTGACTTTGGCAGATGAACGCGCCACGATCCACGGCAA 13175 Query 75549 TTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAAC 75594 | | ||| || ||||||| ||||||||||| ||||| |||| Sbjct 13174 GGTCCAAAATCGTTTTTTGAGAAATTTCCCAAACCGTTTTATAAAC 13129 >seq338 Length=27447 Score = 91.5 bits (100), Expect = 2e-13 Identities = 107/145 (74%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 76699 AATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCC 76758 |||||||| |||||| ||||| | || || || ||| || |||||||||||||| || Sbjct 3092 AATATCAGGATGCCAAGGTTCAACGTAGATAGCGATAGACCCTGGTCGTTTATTACCCCC 3151 Query 76759 CTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGA 76818 ||||| | ||||| || || || ||| || | | |||||| |||||||| ||||| Sbjct 3152 TTGATCAACATATCGTGCTGTAGCATCATATACACGAAGCATTGGTATAATGCCATTAGA 3211 Query 76819 TGTACCATTTGTTCCAGAAATATAA 76843 ||| ||||| || | |||||| Sbjct 3212 ATAACCGTTTGTACCGGCGATATAA 3236 >seq51 Length=295103 Score = 89.7 bits (98), Expect = 7e-13 Identities = 209/313 (67%), Gaps = 2/313 (1%) Strand=Plus/Minus Query 76877 CCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCC 76936 ||||| || || || ||| ||| | ||||||| ||||| || || ||||| || Sbjct 220422 CCTATGCCACCGGCTGATTTGCTGATCAAAGCACAGTTTTTCAGGGTATCGTAGATACCT 220363 Query 76937 TCTATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTT 76996 || ||| |||||| ||||| || ||| || || ||||||||| | | || Sbjct 220362 TCGATAGAATCATCTTTCATGCAAACAAGGAAGCATGAGGACATTTGAGGCGAAGGGGTA 220303 Query 76997 CCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTAT 77056 || ||||| || | || |||| ||||||||||| || || || | || |||||| Sbjct 220302 CCGGCATTGAAGAGAGTGGGAGTGGCATGAGTGAAATATCGCTCGGACATGAGGTTGTAT 220243 Query 77057 GTTT-CAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAACAT 77115 |||| ||| | ||| || ||||| | || || || |||||||| ||||| | ||| Sbjct 220242 GTTTGCAAGACATGC-TCAATATCGTCTCCGTGTATCCCAACAGCGACCCGCATGATCAT 220184 Query 77116 ATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGT 77175 ||| || || || || || | | || | | | |||||| |||||| || Sbjct 220183 ATGTTGTGGCCGCTCAGCAATACGACCGTTAAGGCGAATGAGGTATGACCGTTCCAAGGT 220124 Query 77176 TTTAAAACCAAAA 77188 |||||| |||||| Sbjct 220123 TTTAAATCCAAAA 220111 Score = 87.8 bits (96), Expect = 3e-12 Identities = 162/235 (69%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 76610 AAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCT 76669 |||||||| || |||||||||||| |||| ||| |||| | ||| || || || Sbjct 220748 AAGAGATCCGGAATCCATAGAGCATAGAATAAATCACGGGCGCGCACTTCCTCTTTGCCA 220689 Query 76670 GTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATC 76729 |||||| | | ||| | | | | | ||||||| |||||| ||||| ||||| || Sbjct 220688 TGATTCTTCCTCAAATCGATCATCGCGAAGATATCAGCATGCCAAGGTTCGAGATAGATA 220629 Query 76730 GCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAA 76789 || | | | || || || || ||||| || || || | ||||| ||||| ||| || Sbjct 220628 GCGAAAGCCCCAGGACGCTTGTTACCACCTTGGTCGACATATCGTGCAGTAGCATTGTAC 220569 Query 76790 ACTCTCAACATTGGAATAATGCCGTTAGATGTA-CCATTTGTTCCAGAAATATAA 76843 | | | |||||| | ||| || || || ||| ||||| || || | ||| ||| Sbjct 220568 GCCCGAAGCATTGGCACAATACCATTCGA-GTACCCATTCGTGCCGGCAATGTAA 220515 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712917013312320