Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F002003045.1_202017-02-02] 1,951 sequences; 39,922,873 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq250 114 3e-20 seq1072 109 1e-18 >seq250 Length=164446 Score = 114 bits (126), Expect = 3e-20 Identities = 156/216 (72%), Gaps = 4/216 (2%) Strand=Plus/Minus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 ||| |||||||||||||| || ||||||||||| || ||||| | | ||| | ||||| Sbjct 133697 GAGAACAAGATGAAGAGTCGATTCTTTTTGGATATTATAATCCGAAAGAGTGCGGCCATC 133638 Query 151952 TTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTT 152009 |||||| ||||| || || |||||||| | || ||||| | | ||| || ||||| Sbjct 133637 TTCTAGCTGCTTT--CCAGCAAAGATAAGACGTTGTTGGTCAGGAGGGATACCCTCCTTA 133580 Query 152010 TCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATA 152069 || ||||| ||| || ||| | || | | | || || ||| || || | || || Sbjct 133579 TCCTGAATCTTTGCCTTCACATTGTCAATGGTATCAGACGACTCCACCTCCAAGGTGATG 133520 Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 || || || || | |||||| || |||| ||||||| Sbjct 133519 GTCTTTCCGGTCAAAGTCTTGACAAAGATCTGCATT 133484 Score = 98.7 bits (108), Expect = 2e-15 Identities = 149/210 (71%), Gaps = 4/210 (2%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||||||||| ||||||||||| || ||||| || || | | || | ||||| || | Sbjct 133920 CAAGATGAAGGGTAGACTCTTTCTGAATGTTATAGTCAGAAAGCGTACGACCATCCTCCA 133861 Query 151957 --GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTG 152014 ||||| || || ||||| | | ||| ||||| | | || ||||| || || || Sbjct 133860 ACTGCTTT--CCAGCAAAGATCAAACGCTGTTGGTCGGGAGGAATGCCTTCTTTGTCCTG 133803 Query 152015 AATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTT 152074 ||| ||| |||||| | || | |||| ||| ||| || |||||||| || || || Sbjct 133802 AATCTTTGCCTTGACATTGTCGATAGTGTCAGAAGACTCGACCTCAAGAGTGATCGTCTT 133743 Query 152075 GCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || | |||||||| |||| |||||| Sbjct 133742 TCCGGTCAATGTCTTCACAAAGATCTGCAT 133713 >seq1072 Length=303801 Score = 109 bits (120), Expect = 1e-18 Identities = 149/208 (72%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| |||||||| ||||| || |||||||||||||||| | || | ||||| || | Sbjct 210825 CAAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCGGAAAGCGTGCGACCATCCTCCA 210884 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 || || || || || || | ||||||||| | || || || ||||| || || | Sbjct 210885 ACTGCTTGCCAGCAAAAATGAGACGCTGCTGGTCAGGCGGAATGCCCTCCTTGTCCTGGA 210944 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || || ||| | || | | |||| || ||| || || |||||||| || || | Sbjct 210945 TCTTCGCCTTTACATTGTCAATGGTGTCCGACGACTCAACCTCCAGAGTAATCGTCTTTC 211004 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | ||||| ||||| ||||||| |||||| Sbjct 211005 CTGTGAGGGTCTTGACGAAGATCTGCAT 211032 Score = 95.1 bits (104), Expect = 3e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || ||||| ||||| || ||||| || || |||||||| || | | || | |||||| Sbjct 211277 AGAACAAGGTGAAGGGTTGACTCCTTCTGAATGTTGTAGTCAGAAAGGGTGCGTCCATCT 211336 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || ||||||||||| || | || || || | | || || ||||| || Sbjct 211337 TCGAGCTGCTTGCCGGCGAAGATTAGTCGTTGTTGATCGGGAGGAATGCCCTCCTTATCC 211396 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || || || | || | |||||||| ||| || || | ||| || ||| Sbjct 211397 TGTATCTTGGCCTTCACGTTGTCGATCGTGTCTGAAGACTCGACCTCCAAAGTGATCGTT 211456 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||||||||| ||||| || |||| ||||| Sbjct 211457 TTGCCCGTGAGGGTCTTAACAAAGATTTGCAT 211488 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153791957725121