Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F002003045.1_202017-02-02] 1,951 sequences; 39,922,873 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq250 174 3e-38 seq1072 168 1e-36 seq35 113 9e-20 seq102 89.7 1e-12 seq1332 86.0 1e-11 >seq250 Length=164446 Score = 174 bits (192), Expect = 3e-38 Identities = 153/191 (80%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 ||||| || ||||| ||||||| |||||| || |||||||| | || || || |||||| Sbjct 133903 TCTTTCTGAATGTTATAGTCAGAAAGCGTACGACCATCCTCCAACTGCTTTCCAGCAAAG 133844 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 |||||||| |||||||| ||||| || || ||||| || |||||||| || || | Sbjct 133843 ATCAAACGCTGTTGGTCGGGAGGAATGCCTTCTTTGTCCTGAATCTTTGCCTTGACATTG 133784 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088 ||||||||||| |||| ||||| || |||||||||||||| || ||||| ||||| || Sbjct 133783 TCGATAGTGTCAGAAGACTCGACCTCAAGAGTGATCGTCTTTCCGGTCAATGTCTTCACA 133724 Query 283089 AATATCTGCAT 283099 || |||||||| Sbjct 133723 AAGATCTGCAT 133713 Score = 168 bits (186), Expect = 1e-36 Identities = 174/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| || || || || ||||| | || |||||||||||| || || || | | Sbjct 133711 CCACCACGAAGACGGAGAACAAGATGAAGAGTCGATTCTTTTTGGATATTATAATCCGAA 133652 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || ||||||||||| ||||| || || || |||||||| | ||||||||||||| || Sbjct 133651 AGAGTGCGGCCATCTTCTAGCTGCTTTCCAGCAAAGATAAGACGTTGTTGGTCAGGAGGG 133592 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 ||||||||||| || || |||||||| || || | || || || || || | || || Sbjct 133591 ATACCCTCCTTATCCTGAATCTTTGCCTTCACATTGTCAATGGTATCAGACGACTCCACC 133532 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100 || | ||||| ||||| || ||||||||||| || || ||||||||| Sbjct 133531 TCCAAGGTGATGGTCTTTCCGGTCAAAGTCTTGACAAAGATCTGCATT 133484 Score = 107 bits (118), Expect = 4e-18 Identities = 97/122 (80%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| || ||||| || ||||| | || ||| || || ||||||||||||| | Sbjct 133483 CCACCACGAAGACGAAGAACAAGATGCAGAGTAGATTCCTTCTGAATGTTGTAGTCAGAA 133424 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || ||||| |||||||| ||||| || |||||||||||||| || ||||| ||| ||| Sbjct 133423 AGAGTGCGACCATCCTCGAGTTGCTTTCCGGCAAAGATCAATCGCTGTTGATCAGGAGGA 133364 Query 282993 AT 282994 || Sbjct 133363 AT 133362 Score = 89.7 bits (98), Expect = 1e-12 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 282996 CCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCG 283055 || ||||||||||||||||| ||||| || | || |||||||| |||| ||| || || Sbjct 133299 CCTTCCTTGTCTTGGATCTTGGCTTTGACATTGTCAATAGTGTCAGAAGATTCAACCTCA 133240 Query 283056 AGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || || ||||| || || | ||| || |||||||| ||||| Sbjct 133239 AGGGTAATAGTCTTCCCAGTAAGAGTTTTGACGAATATTTGCAT 133196 >seq1072 Length=303801 Score = 168 bits (186), Expect = 1e-36 Identities = 174/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| || || || ||||| || || || | || ||||| || || ||||| |||| Sbjct 211033 ACCTCCTCGAAGACGAAGGACAAGGTGGAGGGTTGACTCTTTCTGAATATTGTAATCAGA 211092 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||||||||| |||||||| | || || || ||||| || | ||||||||||||| ||| Sbjct 211093 AAGCGTGCGACCATCCTCCAACTGCTTGCCAGCAAAAATGAGACGTTGTTGGTCAGGCGG 211152 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 |||||| |||||||| ||||| || || || || | || |||||||| || | || || Sbjct 211153 AATACCTTCCTTGTCCTGGATTTTCGCCTTAACATTGTCAATAGTGTCAGACGACTCAAC 211212 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || |||||||||||||| ||||| | ||||| ||||| |||||||| Sbjct 211213 CTCAAGAGTGATCGTCTTTCCCGTGAGTGTCTTGACGAAGATCTGCAT 211260 Score = 156 bits (172), Expect = 9e-33 Identities = 149/191 (78%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || || ||||||||||| || | ||||||||| |||||||| | || || || ||||| Sbjct 210842 TCCTTCTGGATGTTGTAATCGGAAAGCGTGCGACCATCCTCCAACTGCTTGCCAGCAAAA 210901 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 || | ||| || |||||| |||||| ||||||||||| |||||||| || ||||| | Sbjct 210902 ATGAGACGCTGCTGGTCAGGCGGAATGCCCTCCTTGTCCTGGATCTTCGCCTTTACATTG 210961 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088 || || |||||||| | || || || ||||| |||||||| || || | ||||| ||| Sbjct 210962 TCAATGGTGTCCGACGACTCAACCTCCAGAGTAATCGTCTTTCCTGTGAGGGTCTTGACG 211021 Query 283089 AATATCTGCAT 283099 || |||||||| Sbjct 211022 AAGATCTGCAT 211032 Score = 152 bits (168), Expect = 1e-31 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || ||||| || ||||| || || || | || || || || ||||||||||||| | Sbjct 211262 CCTCCACGTAGACGAAGAACAAGGTGAAGGGTTGACTCCTTCTGAATGTTGTAGTCAGAA 211321 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || ||||| ||||| || || || || ||||| ||||| | |||||||| || ||| Sbjct 211322 AGGGTGCGTCCATCTTCGAGCTGCTTGCCGGCGAAGATTAGTCGTTGTTGATCGGGAGGA 211381 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || |||||||| || || ||||| || || ||| | ||||| ||||| |||| ||||| Sbjct 211382 ATGCCCTCCTTATCCTGTATCTTGGCCTTCACGTTGTCGATCGTGTCTGAAGACTCGACC 211441 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || | ||||||||| || ||||| | |||||||| || || ||||| Sbjct 211442 TCCAAAGTGATCGTTTTGCCCGTGAGGGTCTTAACAAAGATTTGCAT 211488 Score = 109 bits (120), Expect = 1e-18 Identities = 89/107 (83%), Gaps = 1/107 (1%) Strand=Plus/Plus Query 282994 TACCCT-CCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 |||||| ||||||| |||||||| || || ||| | || || |||||||| | |||||| Sbjct 211668 TACCCTTCCTTGTCCTGGATCTTGGCCTTAACGTTGTCAATCGTGTCCGACGATTCGACC 211727 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| ||||| ||||| || ||||| ||||||||||| |||||||| Sbjct 211728 TCGAGGGTGATTGTCTTGCCGGTCAACGTCTTAACGAAGATCTGCAT 211774 Score = 86.0 bits (94), Expect = 1e-11 Identities = 84/107 (79%), Gaps = 1/107 (1%) Strand=Plus/Plus Query 282994 TACCCT-CCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 |||||| |||| ||||||||||| || || || | ||||||||||| || | || || Sbjct 211953 TACCCTTCCTTATCTTGGATCTTAGCCTTGACATTGTCGATAGTGTCAGAGGACTCAACC 212012 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||||||||| ||||| || || | ||||| ||||| || ||||| Sbjct 212013 TCGAGAGTGATAGTCTTCCCAGTGAGGGTCTTTACGAAGATTTGCAT 212059 Score = 84.2 bits (92), Expect = 5e-11 Identities = 87/114 (76%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || ||||| || ||||| || || || | ||| ||| || || ||||||||||| | | Sbjct 211490 CCTCCACGGAGACGAAGGACAAGGTGGAGTGTGGATTCCTTCTGAATGTTGTAGTCGGAA 211549 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCA 282986 || || || ||||| || || || ||||| ||||| || | ||||||||||||| Sbjct 211550 AGGGTTCGACCATCTTCGAGCTGCTTCCCCGCAAATATAAGACGTTGTTGGTCA 211603 Score = 84.2 bits (92), Expect = 5e-11 Identities = 87/114 (76%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| ||||| || ||||| || || || | ||| ||||||||||||||||| || | Sbjct 211775 ACCGCCACGAAGACGAAGGACTAGGTGGAGGGTGGACTCTTTTTGGATGTTGTAATCCGA 211834 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTC 282985 || || || || ||||| ||||| || || || || |||| |||||||||||| Sbjct 211835 GAGAGTTCGTCCGTCCTCAAGTTGCTTTCCAGCGAAAATCAGACGTTGTTGGTC 211888 >seq35 Length=211330 Score = 113 bits (124), Expect = 9e-20 Identities = 133/179 (74%), Gaps = 1/179 (1%) Strand=Plus/Plus Query 230226 ATCGGCATGAATGCTGATCTCATGGGGCAATATATCGAATTCGTAGCTGATCGTATTTTC 230285 ||||||||||| || | ||| | ||||||||||| ||||| || ||||| | || Sbjct 160285 ATCGGCATGAACGCGACATTGATGTGTCAATATATCGAGTTCGTTGCCGATCGACTACTC 160344 Query 230286 GTGGCGCTAGGGTACGAGAAAGTGTATAACTCCAAGAACCCCTTCGCTTTTATGGAGCTC 230345 || || || || || |||| |||| ||||| | ||||||||||| |||||||| | Sbjct 160345 GTCGCTCTCGGCAACAAGAAGTTGTACAACTCGACGAACCCCTTCGACTTTATGGACATG 160404 Query 230346 ATTTCACTCCAGGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGCGATTA-TCAAAGGC 230403 || || || || ||||| || ||||| || || ||||| || |||||| |||||||| Sbjct 160405 ATCTCGCTTCAAGGGAAGACCAACTTTTTTGAGAAGCGGGTGTCCGATTACTCAAAGGC 160463 >seq102 Length=127478 Score = 89.7 bits (98), Expect = 1e-12 Identities = 87/112 (78%), Gaps = 0/112 (0%) Strand=Plus/Minus Query 282885 CGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCA 282944 |||||||||| || | ||| ||| || || ||||| ||||| | ||| || || ||| Sbjct 68440 CGAAGTACCAAGTGGAGCGTCGATTCCTTCTGAATGTTATAGTCGGAAAGAGTTCGTCCA 68381 Query 282945 TCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATAC 282996 || || ||||| || ||||| ||||||||||||||||| ||| ||||||| Sbjct 68380 TCTTCGAGTTGCTTTCCGGCGAAGATCAAACGTTGTTGATCAGGAGGAATAC 68329 >seq1332 Length=19853 Score = 86.0 bits (94), Expect = 1e-11 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 274671 GCATCACGTACGTTCAGCAACTTACCGCGGAGAGGGAAAACGCCATACCTTTCGCGCCCG 274730 || ||||||||||||||||||||||| ||||| || || |||||| | | | ||||| Sbjct 15975 GCTTCACGTACGTTCAGCAACTTACCTCGGAGGGGAAAGACGCCAAAATTGTTACGCCCT 15916 Query 274731 ATGACCGAAAGACCGGCGATCGCGAGAGTTGCTGCTGAATCTCCCTCTGTGAGAATCAAA 274790 | || ||||| || ||||| || | | || |||||||| ||||| |||||||| Sbjct 15915 ACCACTCCGAGACCAGCAATCGCAAGTGCTTTGGCGGAATCTCCTTCTGTAAGAATCAAT 15856 Query 274791 GTACA 274795 || || Sbjct 15855 GTGCA 15851 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046713034463954