Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F002003045.1_202017-02-02] 1,951 sequences; 39,922,873 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq109 134 1e-26 seq482 98.7 1e-15 seq35 87.8 2e-12 >seq109 Length=35798 Score = 134 bits (148), Expect = 1e-26 Identities = 302/446 (68%), Gaps = 11/446 (2%) Strand=Plus/Plus Query 23503 AATAA-ACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAA 23561 ||||| ||| ||||| || ||| | |||||||| | ||||| | |||||| ||||| Sbjct 2874 AATAAGACAGGCAAATTCGGTATGCATTCCTTCATCGCAGCTAATGAGTTCATTTGAAAA 2933 Query 23562 TGTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCA-GCAAATGATCCGG 23620 ||| || || ||||| ||||||||||| || |||||||||| |||| ||||| || | | Sbjct 2934 TGTCAAACCCGGCATCAATCCTCGTTTCTTCATCCAAAATA-TGCAGGCAAACGACGCAG 2992 Query 23621 AAAAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTAT 23680 | || ||||| || || | || ||||| || || | ||| |||| || |||| Sbjct 2993 AGAAAAAAATGCCTTCGATCGCTGCAAATGCTACCAAACGCTCTGCAAAAGTGAATTTAT 3052 Query 23681 AATCAGAAATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCAA 23740 ||| |||||| | | ||| || || || || | ||| ||| ||||||| Sbjct 3053 TATCTTGAATCCACTGAAGCGCCCATTTTGCTTTTCTATTGATGCACGGAATAGTTTCAA 3112 Query 23741 TTGCTTT---TAAGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAGTA 23797 | | || ||| | || | | | |||| | |||||||| | ||| || | Sbjct 3113 TAGAGTTGAATAACATCGAACGCTCTGGTGCATT---TCGAATATATGTTTGAATAAGCA 3169 Query 23798 AACTATACATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAG 23857 || || |||||||||||||||| || || |||||| || ||||| ||||| | | Sbjct 3170 AAGAGTAGGTTTCAGAATGAATATTCTCCATCATAATCTGGAAACCATAGAAACACCGCG 3229 Query 23858 CTTCAGACAATTGAACATCATT-AAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCA 23916 | || | || || | || || |||||| | | | ||| ||||| ||||||||| Sbjct 3230 CCTCCGGCACCTGTATTTCGTTGGAAAAATGACAAATC-AGATTCTCGTTTACAATACCA 3288 Query 23917 TCACTAGCAGCAAAGAAAGCAAGAAC 23942 || ||||||||||| || || || Sbjct 3289 TCCGACGCAGCAAAGAACGCCAGGAC 3314 >seq482 Length=177074 Score = 98.7 bits (108), Expect = 1e-15 Identities = 286/437 (65%), Gaps = 4/437 (1%) Strand=Plus/Plus Query 23508 ACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAA 23567 ||| || ||||| ||||| |||||||| | || || | || || ||| | |||| Sbjct 124116 ACACGCGAAATCGGTATGTAAACCTTCATCTCGGCTGATGAGCTCGTTTGAATAAGTTAG 124175 Query 23568 TCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAA 23627 || ||||| | || || || || | ||| || || | ||| || || || ||||| || Sbjct 124176 GCCAGGCATCAGGCCGCGCTTCTTTAACCAGAAAATGGAAGCGAACGACCCAGAAAAAAA 124235 Query 23628 AATACCCTCAACAGCCGCAAAGGCCACAAGACG-TGTACCAAA-TGTTGCATTATAATCA 23685 || ||||| ||||| || || ||||| | | | | | ||| || | | || ||| Sbjct 124236 GATTCCCTCGACAGCAGCGAATGCCACCAATCTCTCTGCAAAAGTGCTTCGTTTG--TCA 124293 Query 23686 GAAATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCAATTGCT 23745 || |||||||| | ||| | || || || | ||| |||||||| ||||| Sbjct 124294 GATATCCATTTGAGGGCCCAGTCGGCTTTGCGCTTGATGCACGGTATTGTTTCTATTGCG 124353 Query 23746 TTTAAGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATAC 23805 | |||||| | | || | | ||| | | |||||||| || || | | || Sbjct 124354 TCGAAGAGATATGCGCGTTGATTAAGATCCTTGACGTATGTATCGATAAGCAGAGAGTAA 124413 Query 23806 ATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGAC 23865 |||||||||||| ||||| || || || ||||||||||| | | || |||| Sbjct 124414 GTTTCAGAATGAACGTTTTCCATCATTATTTGGAACCCATAAAAGTAGCGCGCCTCAGCT 124473 Query 23866 AATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCA 23925 ||| || || || |||| | | | ||||||||| || ||||| ||| || Sbjct 124474 GCTTGCACTTCGTTTGAAAAGCGCTCCAACAGATTTTCGTTCACGATACCGTCAGAGGCG 124533 Query 23926 GCAAAGAAAGCAAGAAC 23942 |||||||| ||||| || Sbjct 124534 GCAAAGAATGCAAGGAC 124550 >seq35 Length=211330 Score = 87.8 bits (96), Expect = 2e-12 Identities = 98/131 (75%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 23530 CCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTT 23589 || ||||| | ||| || | || || || || | || || ||||||||||| || || Sbjct 160095 CCCTCATCACGACTGATGAGCTCGTTTGAGAACGCCAAGCCAGGCATTAATCCACGCTTC 160036 Query 23590 TTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAG 23649 || |||||||| || | || || || || || |||||||| || |||||||| |||||| Sbjct 160035 TTCATCCAAAAGATGGACGCGAAGGAGCCAGAGAAGAAAATGCCTTCAACAGCAGCAAAG 159976 Query 23650 GCCACAAGACG 23660 || || ||||| Sbjct 159975 GCTACGAGACG 159965 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521475282211400