Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F002003045.1_202017-02-02] 1,951 sequences; 39,922,873 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq1072 145 5e-30 seq250 96.9 2e-15 >seq1072 Length=303801 Score = 145 bits (160), Expect = 5e-30 Identities = 162/213 (76%), Gaps = 5/213 (2%) Strand=Plus/Plus Query 44128 CACCA-GGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGT 44186 ||||| ||||||| || |||||| |||||||||||||||| || ||| | || | Sbjct 210822 CACCAAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCGGAAAGCGTGCGACCATCCT 210881 Query 44187 CCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCG 44246 ||| |||||| || ||||| || | ||||||||| || | || | || ||||| ||| Sbjct 210882 CCAACTGCTTGCCAGCAAAAATGAGACGCTGCTGGTCAGGCGGAATGCCCTCCTTGTCCT 210941 Query 44247 TTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGT 44304 |||||| ||| || ||| | |||||||| | || || ||||||| |||||||| Sbjct 210942 GGATCTTCGCCTTTACATTGT--CAATGGTGTCCGACGACTCAACCTCCAGAGTAATCGT 210999 Query 44305 CTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||||| ||||||||||| |||||||| ||||| Sbjct 211000 CTTTCCTGTGAGGGTCTTGACGAAGATCTGCAT 211032 Score = 122 bits (134), Expect = 6e-23 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || |||||||| || |||||| || |||||||| || | || ||| | || || Sbjct 211280 ACAAGGTGAAGGGTTGACTCCTTCTGAATGTTGTAGTCAGAAAGGGTGCGTCCATCTTCG 211339 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| ||||| ||||| | || || ||||| | ||| | || ||||| ||| | Sbjct 211340 AGCTGCTTGCCGGCGAAGATTAGTCGTTGTTGATCGGGAGGAATGCCCTCCTTATCCTGT 211399 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||||| | | || ||||| | || || ||||||| || ||||| || Sbjct 211400 ATCTTGGCCTTCACGTTGTCGATCGTGTCTGAAGACTCGACCTCCAAAGTGATCGTTTTG 211459 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 |||||||||||||| || |||||||||||| Sbjct 211460 CCCGTGAGGGTCTTAACAAAGATTTGCATG 211489 Score = 107 bits (118), Expect = 1e-18 Identities = 152/212 (72%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || ||||| || || ||| || || || |||||||| | || ||| | || ||| Sbjct 211052 ACAAGGTGGAGGGTTGACTCTTTCTGAATATTGTAATCAGAAAGCGTGCGACCATCCTCC 211111 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 | |||||| || ||||| || | ||| || || || | || | ||||||||| ||| Sbjct 211112 AACTGCTTGCCAGCAAAAATGAGACGTTGTTGGTCAGGCGGAATACCTTCCTTGTCCTGG 211171 Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 || ||| ||| || ||| | || ||||| | || || ||||| | || ||||||| Sbjct 211172 ATTTTCGCCTTAACATTGT--CAATAGTGTCAGACGACTCAACCTCAAGAGTGATCGTCT 211229 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 |||||||||| ||||| |||||||| |||||| Sbjct 211230 TTCCCGTGAGTGTCTTGACGAAGATCTGCATG 211261 >seq250 Length=164446 Score = 96.9 bits (106), Expect = 2e-15 Identities = 151/213 (71%), Gaps = 5/213 (2%) Strand=Plus/Minus Query 44128 CACCAGG-TGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGT 44186 ||||| | ||||| || ||| || || ||||| || || | || || | || | Sbjct 133923 CACCAAGATGAAGGGTAGACTCTTTCTGAATGTTATAGTCAGAAAGCGTACGACCATCCT 133864 Query 44187 CCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCG 44246 ||| |||||| || ||||||||||||||||| || || | ||| | ||||| || ||| Sbjct 133863 CCAACTGCTTTCCAGCAAAGATCAAACGCTGTTGGTCGGGAGGAATGCCTTCTTTGTCCT 133804 Query 44247 TTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGT 44304 ||||| ||| || ||| | || ||||| | || || ||||| | || ||||| Sbjct 133803 GAATCTTTGCCTTGACATTGT--CGATAGTGTCAGAAGACTCGACCTCAAGAGTGATCGT 133746 Query 44305 CTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||||| || | |||||||| ||||| ||||| Sbjct 133745 CTTTCCGGTCAATGTCTTCACAAAGATCTGCAT 133713 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359981840215767