Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F002003045.1_202017-02-02] 1,951 sequences; 39,922,873 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq250 167 6e-36 seq1072 152 1e-31 seq102 87.8 4e-12 >seq250 Length=164446 Score = 167 bits (184), Expect = 6e-36 Identities = 161/207 (78%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || || ||| | || ||||| || |||||| | |||||||| || || Sbjct 133488 CAGATCTTTGTCAAGACTTTGACCGGAAAGACCATCACCTTGGAGGTGGAGTCGTCTGAT 133547 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || || || || |||||||||||| || || || |||||||| ||||| ||| Sbjct 133548 ACCATTGACAATGTGAAGGCAAAGATTCAGGATAAGGAGGGTATCCCTCCTGACCAACAA 133607 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || |||||||| || ||||| ||||| |||||||| | |||||| | |||||||| || Sbjct 133608 CGTCTTATCTTTGCTGGAAAGCAGCTAGAAGATGGCCGCACTCTTTCGGATTATAATATC 133667 Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130 ||||||||||| || || ||||||||| Sbjct 133668 CAAAAAGAATCGACTCTTCATCTTGTT 133694 Score = 140 bits (154), Expect = 8e-28 Identities = 154/205 (75%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || ||||| || | || ||||| |||||||| || ||||| || || ||| Sbjct 133716 CAGATCTTTGTGAAGACATTGACCGGAAAGACGATCACTCTTGAGGTCGAGTCTTCTGAC 133775 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || ||||| ||||||||||||||||||||| || ||||| ||||| || Sbjct 133776 ACTATCGACAATGTCAAGGCAAAGATTCAGGACAAAGAAGGCATTCCTCCCGACCAACAG 133835 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||| || ||||| ||| | || ||||| | || ||| | || |||||| | Sbjct 133836 CGTTTGATCTTTGCTGGAAAGCAGTTGGAGGATGGTCGTACGCTTTCTGACTATAACATT 133895 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || ||||| || || || ||||||| Sbjct 133896 CAGAAAGAGTCTACCCTTCATCTTG 133920 >seq1072 Length=303801 Score = 152 bits (168), Expect = 1e-31 Identities = 158/207 (76%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || || || || ||||| || ||||||||||| | ||||| || |||||| Sbjct 211485 CAAATCTTTGTTAAGACCCTCACGGGCAAAACGATCACTTTGGAGGTCGAGTCTTCAGAC 211426 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| ||||| || ||||| ||||| || || || || ||||| || || ||| Sbjct 211425 ACGATCGACAACGTGAAGGCCAAGATACAGGATAAGGAGGGCATTCCTCCCGATCAACAA 211366 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||||| ||||||||||| || ||||||||||||||| | || ||| | || || ||| | Sbjct 211365 CGACTAATCTTCGCCGGCAAGCAGCTCGAAGATGGACGCACCCTTTCTGACTACAACATT 211306 Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130 || || || ||||| || || |||||| Sbjct 211305 CAGAAGGAGTCAACCCTTCACCTTGTT 211279 Score = 122 bits (134), Expect = 2e-22 Identities = 150/205 (73%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || ||||||||||| ||||| || || ||||| || || ||| Sbjct 211029 CAGATCTTCGTCAAGACCCTCACAGGAAAGACGATTACTCTGGAGGTTGAGTCGTCGGAC 210970 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || || || || ||||| |||||||| || || || || || |||||||| Sbjct 210969 ACCATTGACAATGTAAAGGCGAAGATCCAGGACAAGGAGGGCATTCCGCCTGACCAGCAG 210910 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || || || || || || ||| | || ||||| | || ||| ||||||| ||| || Sbjct 210909 CGTCTCATTTTTGCTGGCAAGCAGTTGGAGGATGGTCGCACGCTTTCCGATTACAACATC 210850 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || || || || || || || |||| Sbjct 210849 CAGAAGGAGTCGACTCTTCACCTTG 210825 Score = 87.8 bits (96), Expect = 4e-12 Identities = 83/106 (78%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 178024 GAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGA 178083 ||||||| || ||||| ||||| ||||| || || || || |||||||||||||| | | Sbjct 211613 GAATCCCACCTGACCAACAACGTCTTATATTTGCGGGGAAGCAGCTCGAAGATGGTCGAA 211554 Query 178084 CTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGT 178129 | ||| |||| || ||| | || || ||||| ||||| || ||||| Sbjct 211553 CCCTTTCCGACTACAACATTCAGAAGGAATCCACACTCCACCTTGT 211508 >seq102 Length=127478 Score = 87.8 bits (96), Expect = 4e-12 Identities = 82/103 (80%), Gaps = 1/103 (1%) Strand=Plus/Plus Query 178026 ATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACT 178085 || ||||| || || ||||| | |||||||||||||| || |||||||||||| | ||| Sbjct 68331 ATTCCTCCTGATCAACAACGTTTGATCTTCGCCGGAAAGCAACTCGAAGATGGACGAACT 68390 Query 178086 CTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTG 178128 ||| |||| |||||| | || || ||||| || || || |||| Sbjct 68391 CTTTCCGACTATAACATTCAGAAGGAATCGACGCTCCA-CTTG 68432 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203701110105494