Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinus_20polychrous_20[genbank_20GCA_5F000787475.1_202014-11-26] 10,349 sequences; 38,054,542 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq2980 170 2e-37 seq176 158 1e-33 >seq2980 Length=15283 Score = 170 bits (188), Expect = 2e-37 Identities = 388/579 (67%), Gaps = 5/579 (1%) Strand=Plus/Plus Query 16943 TTAAGATGTTTAAACATCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATA 17002 || ||||| | || | || ||| || ||||| ||| || ||||||||||| ||||| Sbjct 11942 TTCAGATGATGGAAAAGCAAACAAGCAAAATCAGTATGCAACCCCTCGTCTCTACTGATC 12001 Query 17003 AGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCG 17062 || || || || | |||| || ||||| || | || || |||||||| ||||| Sbjct 12002 AGCTCATTCGAGTACGTCAGTCCTGGCATGAGGCCCCTCTTTTTCAACCAAAAAATCGCC 12061 Query 17063 GCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCG 17122 ||||| | |||||||||||||| || || || | |||||| |||| | ||||| ||| Sbjct 12062 GCGAAACAGCCAGAAAAGAATATGCCTTCTACCGCTGCAAAGGCGACGAGACGTTCTGCG 12121 Query 17123 TACGTCGCGTCTTTGTTACGA-ATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCA 17181 |||| | | ||| | || ||||| | |||||||||| || | || || || Sbjct 12122 AACGTAGACT-GTTGATCTGATATCCACCGAAGAGCCCACTCGGCCTTCTTCTGGATACA 12180 Query 17182 ATCCATCGTTTCTATGGCCTTAAATAATTTCTCTTTTTCCTGTAGGTCGATTATATACGT 17241 || || || || || | ||||| | ||| | || | ||| || || || Sbjct 12181 GGGAATAGTCTCGATAGCGTCGAATAAGTATTCTCGCTGCTTGACGTCTTGGATGTAGGT 12240 Query 17242 ATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTA 17301 ||| ||||| ||| |||| | || || || ||||||||||| || || || ||||| Sbjct 12241 ATCAATGAGGAGGGAGTACGTCTCTGAATGGATGTTCTCCATCATGATTTGGAAGCCGTA 12300 Query 17302 AAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTT 17361 ||||| || ||||| ||| || || || |||||||||| | || || ||||| Sbjct 12301 GAAGCAACGAGCTTCAGCTGCCTGCACCTCGTTCGAGAATCGTTCGACGAGGTTCTCGTT 12360 Query 17362 CACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATATTTTTCGT- 17420 ||||| || ||| | ||||| || || | || ||| ||||||| ||||| Sbjct 12361 GACGATCCCATCGGAGCCAGCGAAGAAGGCGAGTACGTGCGAGATGAAATGACGTTCGTT 12420 Query 17421 -CCGGT-GTAAGAACGCGCCAGTCCTTTAAATCTTTGGATATATCCACTTCTTCGGGGGT 17478 || | | | | ||||||| | ||| | || | || | ||||||| || Sbjct 12421 ATCGTTCAGACGGGTGTGCCAGTCTACCAGATCGTGCGAGAGGTCGATCTCTTCGGCTGT 12480 Query 17479 CCAAAAACTAGCCACTGCCTTTTTATACATATTCCAAAT 17517 ||| || |||| |||||||||||||||| | |||||| Sbjct 12481 CCAGAATGAAGCCTCTGCCTTTTTATACATTTGCCAAAT 12519 Score = 143 bits (158), Expect = 3e-29 Identities = 280/411 (68%), Gaps = 2/411 (0%) Strand=Plus/Minus Query 16964 CATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAAC 17023 || || || ||| ||| | |||||||| | |||||| | || || || || ||||| Sbjct 14533 CAAGCAAAGTCGGTATGCATGCCCTCGTCACGGCTGATCAACTCATTCGAGAAGGTCAAG 14474 Query 17024 CCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAAT 17083 || |||||| || || ||||| |||||||| || | ||||| || || || ||||| Sbjct 14473 CCAGGCATCAAACCACGCTTCTTCAACCAAAAGATAGATGCGAAAGAGCCGGAGAAGAAG 14414 Query 17084 ATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGA 17143 ||||||||||||| || ||||||| | || |||| | | | | || ||| | ||| Sbjct 14413 ATACCCTCGACGGCGGCGAACGCGACAAGACGCTCGGAGAATGCAGAGTTCTTG-TCCGA 14355 Query 17144 -ATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTT 17202 ||||| | |||| || || || | ||| |||||| || || || || || | Sbjct 14354 GATCCAGCGCAAGGCCCAGTCAGCCTTCTTCTTGATGCAAGGAATGGTCTCGATAGCATC 14295 Query 17203 AAATAATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACAT 17262 || | | ||| || || |||| | || || || |||||||| ||| ||| | Sbjct 14294 GAAGAGGTGCTCGCGTTGCTTAGGGTCCTTGATGTATGTGTCGATGAGAAGGGAGTATGT 14235 Query 17263 TTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTAT 17322 || || || ||||||||||| || || || ||||| ||||| || ||||| ||| Sbjct 14234 CTCTGAATGGATGTTCTCCATCATGATTTGGAAGCCGTAGAAGCAACGAGCTTCAGCTGC 14175 Query 17323 TTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTC 17373 |||||| || | |||| || || | || || ||||| || || || || Sbjct 14174 TTGAACCTCGTTGGAGAACCGCTCGACGAGGTTCTCGTTGACAATACCATC 14124 >seq176 Length=24199 Score = 158 bits (174), Expect = 1e-33 Identities = 297/437 (68%), Gaps = 0/437 (0%) Strand=Plus/Minus Query 16955 AACATCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAA 17014 |||| || || ||||| || ||| | |||||||| | |||||| ||||| || || Sbjct 19895 AACAGGAGGCACGCGAAGTCAGTATGCATGCCCTCGTCGCGGCTGATCAGTTCATTGGAG 19836 Query 17015 AATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCA 17074 || ||||| || ||||| |||| ||||| | ||| || || | || ||||| || Sbjct 19835 AACGTCAAGCCAGGCATGAGACCTCTCTTCTTGAGCCAGAAGATGGACGCAAACGAGCCC 19776 Query 17075 GAAAAGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCT 17134 || ||||| || || || || | ||||| || | | |||||||||| ||| | | Sbjct 19775 GAGAAGAAGATTCCTTCAACCGCAGCAAAGGCAACGAGTCGTTCGGCGAACGCGGACTTC 19716 Query 17135 TTGTTACGAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCT 17194 |||| ||||| |||| || || || | ||| |||||| |||||||| Sbjct 19715 TTGTCTGAGATCCAGCGTAAAGCCCAGTCAGCCTTCTTCTTGATGCAAGGAATCGTTTCG 19656 Query 17195 ATGGCCTTAAATAATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGG 17254 ||||| | || | | ||| || |||| | || |||||||||||||| ||| Sbjct 19655 ATGGCGTCGAAGAGATGCTCCCGTTGGGTCTGGTCTTTGATGTACGTATCGATGAGGAGG 19596 Query 17255 CTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCT 17314 ||| | |||||||| ||||||||||| || || || || || ||||| ||||| Sbjct 19595 GAATACGTCTCGGAGTGAATGTTCTCCATCATGATTTGGAAGCCATAGAAGCAGCGGGCC 19536 Query 17315 TCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCG 17374 || ||| ||| ||||| | |||| ||||| | ||||| ||||| || || ||||| Sbjct 19535 TCAGCTGCTTGGACTTCGTTGGAGAACCGTTCAACGAGATTCTCGTTGACAATACCGTCC 19476 Query 17375 CTCGCGGCGAAAAACGC 17391 || ||||| || || Sbjct 19475 GAAGCCGCGAAGAAAGC 19459 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517478649007320