Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinus_20polychrous_20[genbank_20GCA_5F000787475.1_202014-11-26] 10,349 sequences; 38,054,542 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq176 132 5e-26 seq2980 131 2e-25 >seq176 Length=24199 Score = 132 bits (146), Expect = 5e-26 Identities = 288/426 (68%), Gaps = 14/426 (3%) Strand=Plus/Minus Query 16193 AACATTAGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAA 16252 |||| || ||||||||||| ||| | || ||||| | |||||| ||||| ||||| Sbjct 19895 AACAGGAGGCACGCGAAGTCAGTATGCATGCCCTCGTCGCGGCTGATCAGTTCATTGGAG 19836 Query 16253 AAAGTTAACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCC 16312 || || || || ||||| |||| ||||| | |||||| || | ||||| || ||| Sbjct 19835 AACGTCAAGCCAGGCATGAGACCTCTCTTCTTGAGCCAGAAGATGGACGCAAACGAGCCC 19776 Query 16313 GAAAAGAATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAG-CATC 16371 || ||||| || || ||||| | ||||| || | | |||||| ||| ||| | | || Sbjct 19775 GAGAAGAAGATTCCTTCAACCGCAGCAAAGGCAACGAGTCGTTCGGCGAACGCGGACTTC 19716 Query 16372 TTTATTACGAATCCATTTCTGTA---CCCATTCGGCTTTTTGTTTTATACAATCCATCGT 16428 || | | ||||| ||| |||| || || || | || || ||| ||||| Sbjct 19715 TTGTCTGAG-ATCCA---GCGTAAAGCCCAGTCAGCCTTCTTCTTGATGCAAGGAATCGT 19660 Query 16429 TTCTATGGCCTTAAACAATTTCTC---TTTTTCCTGAATATCGATTATATACGTATCAAT 16485 ||| ||||| | || | | ||| || ||| || | || |||||||| || Sbjct 19659 TTCGATGGCGTCGAAGAGATGCTCCCGTTGGGTCTG---GTCTTTGATGTACGTATCGAT 19603 Query 16486 CAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCA 16545 || | ||| | || ||||| |||||||| || || || || ||||||||||| Sbjct 19602 GAGGAGGGAATACGTCTCGGAGTGAATGTTCTCCATCATGATTTGGAAGCCATAGAAGCA 19543 Query 16546 TCGAGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGAT 16605 || ||||| ||| ||| ||||| | | || ||||| | || ||||| || || || Sbjct 19542 GCGGGCCTCAGCTGCTTGGACTTCGTTGGAGAACCGTTCAACGAGATTCTCGTTGACAAT 19483 Query 16606 ACCGTC 16611 |||||| Sbjct 19482 ACCGTC 19477 >seq2980 Length=15283 Score = 131 bits (144), Expect = 2e-25 Identities = 351/536 (65%), Gaps = 3/536 (1%) Strand=Plus/Plus Query 16223 CCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTC 16282 || |||||||| ||||| || || || || | || | |||||||| || | || Sbjct 11984 CCCTCGTCTCTACTGATCAGCTCATTCGAGTACGTCAGTCCTGGCATGAGGCCCCTCTTT 12043 Query 16283 TTTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATACCCTCAACAGATGCAAAA 16342 || ||||| || ||||| || || | || ||||||||||| || || || | |||||| Sbjct 12044 TTCAACCAAAAAATCGCCGCGAAACAGCCAGAAAAGAATATGCCTTCTACCGCTGCAAAG 12103 Query 16343 GCGATTAATCGTTCCGCGTACGTAGCATCTTTATTACGAATCCATTTCTGTACCCATTCG 16402 |||| | ||||| ||| |||||| | || || ||||| | |||| ||| Sbjct 12104 GCGACGAGACGTTCTGCGAACGTAGACTGTTGATCTGATATCCACCGAAGAGCCCACTCG 12163 Query 16403 GCTTTTTGTTTTATACAATCCATCGTTTCTATGGCCTTAAACAATTTCTCTTTTTCCTGA 16462 || || | | ||||| || || || || || | || || | ||| | || Sbjct 12164 GCCTTCTTCTGGATACAGGGAATAGTCTCGATAGCGTCGAATAAGTATTCTCGCTGCTTG 12223 Query 16463 ATATCGATTATATACGTATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATG 16522 | || || || |||||||| || | |||| | ||||| || |||||||| || Sbjct 12224 ACGTCTTGGATGTAGGTATCAATGAGGAGGGAGTACGTCTCTGAATGGATGTTCTCCATC 12283 Query 16523 GCTATCTGAAATCCATAGAAGCATCGAGCCTCCGCTATTTGTACTTCCACGTAAAATCGT 16582 || || || || |||||||| ||||| || ||| || || || | |||||| Sbjct 12284 ATGATTTGGAAGCCGTAGAAGCAACGAGCTTCAGCTGCCTGCACCTCGTTCGAGAATCGT 12343 Query 16583 TCCGCCAGGTTCTCATTCACGATACCGTCACTTGCAGCAAAAAACGCCAATATGTGCTTA 16642 || | |||||||| || ||||| || || |||| || || || | || |||| Sbjct 12344 TCGACGAGGTTCTCGTTGACGATCCCATCGGAGCCAGCGAAGAAGGCGAGTACGTGCGAG 12403 Query 16643 ATGAAATATTTTTCGTCAGATGTAAGAA---TATGCCAATCTTTTAAATCTTTGGATATA 16699 ||||||| ||||| | | ||| | ||||| ||| | ||| | || | Sbjct 12404 ATGAAATGACGTTCGTTATCGTTCAGACGGGTGTGCCAGTCTACCAGATCGTGCGAGAGG 12463 Query 16700 TCCACTTCTTCTGGCGTCCAAAAGCTAGCCACTGCCTTTTTATACATTTTCCAAAT 16755 || | ||||| | ||||| || |||| |||||||||||||||||| |||||| Sbjct 12464 TCGATCTCTTCGGCTGTCCAGAATGAAGCCTCTGCCTTTTTATACATTTGCCAAAT 12519 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511348242154680