Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinus_20polychrous_20[genbank_20GCA_5F000787475.1_202014-11-26] 10,349 sequences; 38,054,542 total letters Query= NC_001317.1 Length=30624 Score E Sequences producing significant alignments: (Bits) Value seq9209 140 6e-29 >seq9209 Length=729 Score = 140 bits (154), Expect = 6e-29 Identities = 442/670 (66%), Gaps = 49/670 (7%) Strand=Plus/Minus Query 2833 GCTCGCCAGACCAGAAGGGATAAGCGCCGTGCGCCAGCGTTGAGGGTGTCGAAAAGTAGG 2892 ||||||| | |||| ||||||| || ||||||| | || || ||||| ||||||| Sbjct 659 GCTCGCCGGTCCAGTAGGGATAGGCAGGATGCGCCACGCTGGACGGCGTCGAGAAGTAGG 600 Query 2893 TTGAGCGCAGATGCTTCTGCGAGGCCATGCCCGAGGCGACTTTGCGCAGCTTCTGAAAAT 2952 || |||| | ||| || | ||||||||||||||||| ||| ||| | || || Sbjct 599 TTTTGCGCCACTTCTTGTGGGTCGCCATGCCCGAGGCGACCTTGTTCAGTTCCTCGAACG 540 Query 2953 TCGGGATCCAGAATATTTCATCGACATACAGGTCGCCGTTATGGCTCTGAGCCGTGTTGG 3012 ||| |||||| | ||| |||| ||| | | ||||| ||| ||| |||||| | Sbjct 539 AGTGGACCCAGAAGAATTCGTCGAAATAGAAATTGCCGTGGCGGCCCTGCGCCGTGCGGA 480 Query 3013 AGTTGGTACCGAGAAAAATCAGCTTTG-CGCCG-TTGTT------GCC------------ 3052 ||||||| ||||| || ||| | | ||||| | || ||| Sbjct 479 AGTTGGTGCCGAGGAAGTGCAGTTCGGCCGCCGCCTCTTCCTCCGGCCGCAGGTCCGAGG 420 Query 3053 -AATGACAATCGGGTCGCCGGTCAG-GTCGACGTCAACCAG--TCGCGCAAACTGTATGA 3108 || | ||||| |||||| ||| ||| ||| | ||||| | ||| || ||| | || Sbjct 419 TGATCAGCATCGGATCGCCGCCCAGCGTC-ACGCCCACCAGCTTGGCG-AAGCTG-ACGA 363 Query 3109 TGTATTCGCGGAACACGTAAGCCTGCGTTTTACTGGCCGACAGAAAAATCTGGTTATGGC 3168 |||| ||||||| || ||||| | ||| |||||||| || ||||||||| ||| Sbjct 362 TGTAGCTGCGGAACTGGTGCGCCTGGGCTTTCGATGCCGACAGGAAGATCTGGTTACGGC 303 Query 3169 CGGTCTTGAGTGC-TCGCAGCAGTGCCTCACGGGAAAAATAGAACGTCGCGCCAATCTGG 3227 |||||| || || ||| | ||| || || || || ||| | |||||||| |||||| Sbjct 302 CGGTCTCGATCGCGTCG-ATCAGGGCTTCGAAGGCGAAGTAGTAGGTCGCGCCGATCTGG 244 Query 3228 CGGGATTTGAGAATGTCGCGAATACGGTGTGCCAGTCCTGCGCGGT--ACCACTGCAACT 3285 || || || || || ||| |||| || | | ||||| | |||| || || Sbjct 243 CGTGACTTCAGGATCATGCG-----GGTGCGCTGGCTCAGCGCGTTCCACCAGGTCAGCT 189 Query 3286 GGTACTCG-AAAGACTGGTCGAAAAATAATTCCTCCAGCTTTTCGATAGC---CTCGTCG 3341 |||| ||| | || | || | || | || || |||| || |||| || Sbjct 188 GGTAGTCGTAGAGGC-CCTCAAGGAAGATGCGCTTGAG---TTCGGCCGCCTGCTCGGCG 133 Query 3342 CTGAAAAAATTCTTTTTCGGCTTCTTGCGCTCACCCTTGTTGCGGTTGGCGACGTTGGGG 3401 |||| || || ||||||||||||||| | || ||| ||||||||||| || | Sbjct 132 GTGAAGTGGTTTTTCTTCGGCTTCTTGCGCACCCCGGCGTTCCGGTTGGCGACCTTCTCG 73 Query 3402 TTAAGGTCGGCCTCGTTGCCGGTCTGGCTG----TAGCGGTTAACGCGTGCCAGTCGTTC 3457 |||||||| || | || | | | ||||| |||||| || || || || | ||| Sbjct 72 TTAAGGTC-ACCGCTATGGCCGCCCGGCTGCTCATAGCGGCGCACACGGGCAAGGCTTTC 14 Query 3458 AATCTGCCGC 3467 ||||| ||| Sbjct 13 GATCTGGCGC 4 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 97863171688468