Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinus_20polychrous_20[genbank_20GCA_5F000787475.1_202014-11-26] 10,349 sequences; 38,054,542 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq176 304 1e-77 seq2980 293 2e-74 seq1988 136 4e-27 seq105 120 3e-22 seq3402 91.5 2e-13 >seq176 Length=24199 Score = 304 bits (336), Expect = 1e-77 Identities = 412/573 (72%), Gaps = 15/573 (3%) Strand=Plus/Plus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| || ||||| ||||| |||||||| | || ||| |||||||| Sbjct 19330 ATCTGGCAAATGTACAAGAAAGCCGAAGCGTCATTCTGGACAGCGGAAGAGATGGACCTG 19389 Query 116696 TCCAAGGACACGAGCGACTGGGAGCGC---TTGAACGACAACGAGCGCCATTTCATCAAG 116752 || || || | | ||||||| | | | ||||||||||||||||||||||||||| Sbjct 19390 TCGAAAGATATGCACGACTGGCAACACCGGTTGAACGACAACGAGCGCCATTTCATCTCT 19449 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 || || || || || ||||| || ||||| || |||||||||||||| || || || Sbjct 19450 CATGTTCTTGCTTTCTTCGCGGCTTCGGACGGTATTGTCAACGAGAATCTCGTTGAACGG 19509 Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATG 116872 ||| | | || || || | || ||||| || |||||||| ||||| || ||| ||| Sbjct 19510 TTCTCCAACGAAGTCCAAGCAGCTGAGGCCCGCTGCTTCTATGGCTTCCAAATCATGATG 19569 Query 116873 GAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGT----GCGCTCTTC 116928 |||||| | ||||| || | |||||| ||||||||| |||||| | | | | Sbjct 19570 GAGAACATTCACTCCGAGACGTATTCCCTCCTCATCGATACGTACATCAAAGACCAGACC 19629 Query 116929 GGA--GGAGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAG 116986 | |||| | ||| || |||||||||| ||||| || ||| |||| ||||| Sbjct 19630 CAACGGGAGCATCTC------TTCGACGCCATCGAAACGATTCCTTGCATCAAGAAGAAG 19683 Query 116987 GCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTG 117046 || || ||||| | ||||||||| | | || || |||| |||| ||| || || || Sbjct 19684 GCTGACTGGGCTTTACGCTGGATCTCAGACAAGAAGTCCGCGTTCGCCGAACGACTCGTT 19743 Query 117047 GCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTC 117106 ||||| || || || || || ||||||| |||||| || || |||| || |||||| Sbjct 19744 GCCTTTGCTGCGGTTGAAGGAATCTTCTTCTCGGGCTCGTTTGCGTCCATCTTCTGGCTC 19803 Query 117107 AAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAG 117166 ||||| | || |||||||| ||| |||| ||| ||| || || ||| | | |||||| Sbjct 19804 AAGAAGAGAGGTCTCATGCCTGGCTTGACGTTCTCCAATGAACTGATCAGCCGCGACGAG 19863 Query 117167 GGTCTGCATTGCGACTTTGCCTGTTTGCTGTTC 117199 || ||||| ||||| || || | |||||| Sbjct 19864 GGCATGCATACTGACTTCGCGTGCCTCCTGTTC 19896 >seq2980 Length=15283 Score = 293 bits (324), Expect = 2e-74 Identities = 454/642 (71%), Gaps = 11/642 (2%) Strand=Plus/Minus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| ||||| |||||||| ||||| || |||||||| | ||| ||| | ||||| Sbjct 12519 ATTTGGCAAATGTATAAAAAGGCAGAGGCTTCATTCTGGACAGCCGAAGAGATCGACCTC 12460 Query 116696 TCCAAGGACACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752 || | || | |||||| | || ||||||| ||||| || ||||||||| | Sbjct 12459 TCGCACGATCTGGTAGACTGGCACACCCGTCTGAACGATAACGAACGTCATTTCATCTCG 12400 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 ||||| || ||||| ||||| | | ||| || |||||||||||||| || ||||| || Sbjct 12399 CACGTACTCGCCTTCTTCGCTGGCTCCGATGGGATCGTCAACGAGAACCTCGTCGAACGA 12340 Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATG 116872 ||| | | |||||||||| || || || || |||||||||||||| || ||| ||| Sbjct 12339 TTCTCGAACGAGGTGCAGGCAGCTGAAGCTCGTTGCTTCTACGGCTTCCAAATCATGATG 12280 Query 116873 GAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGTGC-GCTCTTC--G 116929 |||||| | || || || | ||| || |||||| || || ||| | | | || | Sbjct 12279 GAGAACATCCATTCAGAGACGTACTCCCTCCTCATTGATACCTACATCCAAGACGTCAAG 12220 Query 116930 GAG-GAGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGC 116988 || ||||| | | || || |||| |||||||| || || || || | ||||||| Sbjct 12219 CAGCGAGAA--TAC--TTATTCGACGCTATCGAGACTATTCCCTGTATCCAGAAGAAGGC 12164 Query 116989 CGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGC 117048 ||||||||| || || ||||| | | | || | | |||| || || || || || Sbjct 12163 CGAGTGGGCTCTTCGGTGGATATCAGATCAACAGTCTACGTTCGCAGAACGTCTCGTCGC 12104 Query 117049 CTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAA 117108 ||| || || || || ||| | |||||||| ||| ||||||| || || |||||| | || Sbjct 12103 CTTTGCAGCGGTAGAAGGCATATTCTTTTCTGGCTGTTTCGCGGCGATTTTTTGGTTGAA 12044 Query 117109 GAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGG 117168 || | ||||||||||| || ||||| | | || ||||| ||| || |||||||| Sbjct 12043 AAAGAGGGGCCTCATGCCAGGACTGACGTACTCGAATGAGCTGATCAGTAGAGACGAGGG 11984 Query 117169 TCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGAGCGCGGC 117228 ||||| || ||||| |||||||| ||| | ||| || | | ||||| ||| Sbjct 11983 GTTGCATACTGATTTTGCTTGTTTGCTTTTCCATCATCTGAAGAGGAGACCGCATCCGGA 11924 Query 117229 GCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCA 117270 || ||||| ||||| || || ||||| | |||||||| Sbjct 11923 TGTAGTGAGGGATATCGTGACAGAGGCGGTTACTATCGAGCA 11882 Score = 271 bits (300), Expect = 8e-68 Identities = 404/571 (71%), Gaps = 9/571 (2%) Strand=Plus/Plus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| ||||| || ||||| || ||||| |||||||| | |||||| |||| || Sbjct 13977 ATCTGGCAAATGTATAAGAAGGCTGAAGCGTCCTTCTGGACTGCTGAGGAGATGGATTTG 14036 Query 116696 TCCAAGGACACGAGCGACTGGGAGCGCT---TGAACGACAACGAGCGCCATTTCATCAAG 116752 || |||||| ||||||||| | | |||||||| || || || |||||| Sbjct 14037 TCGAAGGACCTCCACGACTGGGACAACAGACTCAACGACAATGAACGTCACTTCATCTCA 14096 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 ||||| || ||||| || || ||| || || || ||||||||||| || |||||||| Sbjct 14097 CACGTCCTCGCCTTCTTTGCTGCCTCGGATGGTATTGTCAACGAGAACCTCGTCGAGCGG 14156 Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATG 116872 ||| | | ||||| || | || || || || |||||||||||||| || ||| ||| Sbjct 14157 TTCTCCAACGAGGTTCAAGCAGCTGAAGCTCGTTGCTTCTACGGCTTCCAAATCATGATG 14216 Query 116873 GAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGT---GCGCTCTTCG 116929 |||||| | || || || | || || ||||||||||| ||| | | | || | Sbjct 14217 GAGAACATCCATTCAGAGACATACTCCCTTCTCATCGACACATACATCAAGGACCCTAAG 14276 Query 116930 GAGGAGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCC 116989 | ||| || | || | || |||||||| || || ||| |||| ||||||| Sbjct 14277 CAACGCGAGCACC---TCTTCGATGCTATCGAGACCATTCCTTGCATCAAGAAGAAGGCT 14333 Query 116990 GAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCC 117049 || ||||| ||||||||||| | | || | | || ||| |||||| || || || Sbjct 14334 GACTGGGCCTTGCGCTGGATCTCGGACAAGAACTCTGCATTCTCCGAGCGTCTTGTCGCG 14393 Query 117050 TTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAG 117109 ||||| ||||||||||| ||||||| || ||| |||||| | || |||||| | ||| Sbjct 14394 TTCGCCGCCGTCGAGGGTATCTTCTTCTCCGGCTCTTTCGCATCTATCTTTTGGTTGAAG 14453 Query 117110 AAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGT 117169 || || || | ||||| ||| |||| ||| || ||| | ||| | | |||||||| Sbjct 14454 AAGCGTGGTTTGATGCCTGGCTTGACCTTCTCGAATGAGTTGATCAGCCGTGACGAGGGC 14513 Query 117170 CTGCATTGCGACTTTGCCTGTTTGCTGTTCA 117200 ||||| ||||||||| || ||||| |||| Sbjct 14514 ATGCATACCGACTTTGCTTGCTTGCTCTTCA 14544 >seq1988 Length=7662 Score = 136 bits (150), Expect = 4e-27 Identities = 156/207 (75%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || |||||||| || || || ||||| |||||||| |||| ||||| || || Sbjct 3575 ATGCAGATCTTCGTAAAGACCCTGACTGGCAAGACCATCACGCTCGAGGTCGAGTCCTCC 3634 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | | |||| |||||| ||| || | ||||| ||||| || || | ||||| Sbjct 3635 GATACCATTGACAACG-TCAAGGCAAAGATCCAAGACAAGGAGGGTATTCCACCCGACCA 3693 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||||| ||| ||||| ||||| || || | ||||| ||| || ||||| Sbjct 3694 GCAGCGTCTCATCTTCGCCGGCAAGCAGCTCGAAGATGGCCGCACTCTCTCGGATTACAA 3753 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCT 40895 |||||||||||| ||| || ||||| Sbjct 3754 TATCCAGAAGGAGAGCACCCTCCATCT 3780 Score = 129 bits (142), Expect = 6e-25 Identities = 156/210 (74%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || ||| | ||||| || || |||||| |||| || || | || Sbjct 4656 ATGCAAATCTTCGTCAAGACGTTGACGGGTAAGACTATCACCCTCGAGGTGGAGTCTTCC 4715 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| |||||| || |||| ||||| ||||| ||||| | ||||| Sbjct 4716 GACACCATCGATAACG-TCAAGGCCAAGATTCAGGACAAGGAGGGTATCCCTCCCGACCA 4774 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 || ||||| |||| ||| ||||| || || || |||| || || ||| |||||||| Sbjct 4775 ACAGCGACTGATCTTCGCTGGCAAGCAACTCGAGGACGGTCGTACTCTCTCTGACTACAA 4834 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||| ||||||||| ||||| || || || Sbjct 4835 CATTCAGAAGGAGAGTACGCTCCACCTTGT 4864 Score = 118 bits (130), Expect = 1e-21 Identities = 144/194 (74%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 |||||| || ||||| || || | || || || |||||||| | || ||||| | | Sbjct 4087 AATGCAGATCTTCGTCAAGACTTTGACCGGAAAGACCATCACTCTTGAGGTCGAGTCGTC 4146 Query 40749 CGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807 |||| | | |||| |||||| ||| || | ||||| ||||| || || | |||| Sbjct 4147 TGACACGATCGACAACG-TCAAGGCAAAGATCCAGGACAAGGAGGGTATTCCGCCAGACC 4205 Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867 |||| || ||||||| ||| ||||| ||||| || || | ||||||||| ||| |||| Sbjct 4206 AGCAGCGTCTCATCTTCGCTGGCAAGCAGCTTGAGGATGGTCGCACCCTCTCCGATTACA 4265 Query 40868 ACATCCAGAAGGAG 40881 |||||||||||||| Sbjct 4266 ACATCCAGAAGGAG 4279 Score = 116 bits (128), Expect = 4e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || ||| | |||||||| || |||||| |||| ||||| || | Sbjct 3860 ATGCAGATCTTCGTCAAGACGTTGACGGGCAAGACGATCACCCTCGAAGTCGAGTCCTCT 3919 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | |||||| || || | ||||| |||||||| || | |||||| Sbjct 3920 GACACGATCGACAATGTCAAGGCTAAGATCCAGGACAAGGAGGGCATTCCTCCTGACCAG 3979 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 ||||| | |||| || || || ||||| || || | |||||||| ||||||||| Sbjct 3980 CAACGTTTGATCTTTGCTGGAAAGCAGCTCGAGGATGGCCGCACCCTTTCTGACTACAAC 4039 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 || ||||||||| ||| || || || || Sbjct 4040 ATTCAGAAGGAGAGCACCCTTCACCTCGT 4068 Score = 102 bits (112), Expect = 8e-17 Identities = 146/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || | || ||||| ||||||||| | || ||||| | | Sbjct 4370 ATGCAGATCTTCGTGAAGACTTTGACCGGCAAGACCATCACCCTGGAGGTCGAGTCTTCT 4429 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 || | | | | | | |||| ||| |||| ||||| |||||||| || | ||||| Sbjct 4430 GATACCATCGACAATGTTAAGGCAAAGATTCAAGACAAGGAGGGCATTCCTCCTGACCAA 4489 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 ||||| ||||||| || || || || || || || | |||||||| || ||||| Sbjct 4490 CAACGTCTCATCTTTGCCGGTAAGCAACTTGAGGATGGCCGCACCCTGTCGGATTACAAT 4549 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCT 40895 |||||||||||| | || || || || Sbjct 4550 ATCCAGAAGGAGTCTACCCTCCACCT 4575 >seq105 Length=629 Score = 120 bits (132), Expect = 3e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || ||||||||||| || |||||| | || ||||| | || Sbjct 152 ATGCAAATCTTCGTTAAGACTCTCACGGGCAAGACGATCACCTTGGAGGTCGAGTCGTCC 211 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||| || || | ||||| |||||||| ||| | || || Sbjct 212 GACACTATTGACAATGTGAAGGCGAAGATCCAAGACAAGGAGGGCATTCCCCCAGATCAA 271 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 ||||| ||||||| ||| || || ||||| || || | || || ||| || |||||| Sbjct 272 CAACGTCTCATCTTCGCTGGAAAGCAGCTCGAGGATGGCCGGACTCTCTCTGATTACAAC 331 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||||||||||| | || || || || || Sbjct 332 ATCCAGAAGGAGTCTACCCTTCACCTCGT 360 Score = 116 bits (128), Expect = 4e-21 Identities = 152/208 (73%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 |||||| || || || || |||||||| || |||||||| || | || ||||| | | Sbjct 379 AATGCAGATCTTTGTCAAGACGCTCACAGGGAAAACCATTACGTTGGAGGTCGAGTCTTC 438 Query 40749 CGACA-GCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807 ||||| | || |||| | |||| ||||| | ||||| || || ||||| | |||| Sbjct 439 CGACACGATTGACAACG-TGAAGGCGAAAATCCAAGACAAGGAAGGAATCCCACCCGACC 497 Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867 ||||||| || |||| ||| ||||| || || || || | || || ||| |||||||| Sbjct 498 AGCAACGTCTGATCTTCGCTGGCAAGCAACTCGAAGATGGACGTACACTCTCCGACTACA 557 Query 40868 ACATCCAGAAGGAGGCCACGCTGCATCT 40895 |||| || |||||| ||||| || || Sbjct 558 ACATTCAAAAGGAGAGTACGCTTCACCT 585 >seq3402 Length=1793 Score = 91.5 bits (100), Expect = 2e-13 Identities = 79/98 (81%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 40795 ATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACC 40854 |||||| | |||||||| ||||| |||| ||||||||| ||||| || || | ||||| Sbjct 1501 ATCCCCCCCGACCAGCAGCGACTGATCTTCGCGGGCAAGCAGCTCGAGGATGGTCGCACT 1442 Query 40855 CTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCA 40892 |||| ||| ||||||||||| |||||| | || || || Sbjct 1441 CTCAGCGATTACAACATCCAAAAGGAGTCGACCCTTCA 1404 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515152549956240