Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinus_20polychrous_20[genbank_20GCA_5F000787475.1_202014-11-26] 10,349 sequences; 38,054,542 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq1988 132 4e-26 seq105 125 6e-24 seq3402 98.7 9e-16 >seq1988 Length=7662 Score = 132 bits (146), Expect = 4e-26 Identities = 156/210 (74%), Gaps = 1/210 (0%) Strand=Plus/Minus Query 118530 ACCAAG-TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 |||||| |||| |||||||| || || || |||||||| || ||||| |||||| Sbjct 4579 ACCAAGGTGGAGGGTAGACTCCTTCTGGATATTGTAATCCGACAGGGTGCGGCCATCCTC 4520 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 || || || || || |||||||||| || || || ||||| ||||||||||||||| Sbjct 4519 AAGTTGCTTACCGGCAAAGATGAGACGTTGTTGGTCAGGAGGAATGCCCTCCTTGTCTTG 4460 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 ||| ||| ||||| | |||| ||| || | ||||||||| | ||| | || || Sbjct 4459 AATCTTTGCCTTAACATTGTCGATGGTATCAGAAGACTCGACCTCCAGGGTGATGGTCTT 4400 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||||||| ||| || || || |||||||| Sbjct 4399 GCCGGTCAAAGTCTTCACGAAGATCTGCAT 4370 Score = 125 bits (138), Expect = 6e-24 Identities = 157/214 (73%), Gaps = 1/214 (0%) Strand=Plus/Minus Query 118530 ACCAAG-TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 |||||| |||| || ||| || || || |||||||| | |||||| ||| || Sbjct 3784 ACCAAGATGGAGGGTGCTCTCCTTCTGGATATTGTAATCCGAGAGAGTGCGGCCATCTTC 3725 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 |||||| || || ||| |||||||||||||||| ||||| || || |||||||||||| Sbjct 3724 GAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGTGGAATACCCTCCTTGTCTTG 3665 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 || ||| || || | || | ||| || | | ||||||||||| || | || || Sbjct 3664 GATCTTTGCCTTGACGTTGTCAATGGTATCGGAGGACTCGACCTCGAGCGTGATGGTCTT 3605 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 118742 ||| ||||| || ||||| || ||||||||| || Sbjct 3604 GCCAGTCAGGGTCTTTACGAAGATCTGCATGACT 3571 Score = 114 bits (126), Expect = 1e-20 Identities = 152/210 (72%), Gaps = 1/210 (0%) Strand=Plus/Minus Query 118530 ACCAAG-TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 |||||| || | ||| ||| || || |||||||||||| | ||||| |||||| Sbjct 4297 ACCAAGGTGTAGGGTACTCTCCTTCTGGATGTTGTAATCGGAGAGGGTGCGACCATCCTC 4238 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 ||||| || |||||| |||||||||||||||| || || || || ||||||||||| Sbjct 4237 AAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCTGGCGGAATACCCTCCTTGTCCTG 4178 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 || ||| || || | |||| ||||| | ||||||||| | || | || || Sbjct 4177 GATCTTTGCCTTGACGTTGTCGATCGTGTCAGACGACTCGACCTCAAGAGTGATGGTCTT 4118 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||||||| ||| || || || |||||||| Sbjct 4117 TCCGGTCAAAGTCTTGACGAAGATCTGCAT 4088 Score = 113 bits (124), Expect = 4e-20 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 118547 CTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTA 118606 ||| || ||||||||||| || | ||||| |||||||||||| |||||||| | Sbjct 4051 CTCCTTCTGAATGTTGTAGTCAGAAAGGGTGCGGCCATCCTCGAGCTGCTTTCCAGCAAA 3992 Query 118607 GATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTG 118666 ||| | ||| ||||| || ||||| |||||||||||||| || || || || | Sbjct 3991 GATCAAACGTTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGGATCTTAGCCTTGACATT 3932 Query 118667 TTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 118726 |||| ||||| | | |||||| |||| ||| | ||| ||||| |||| || || || Sbjct 3931 GTCGATCGTGTCAGAGGACTCGACTTCGAGGGTGATCGTCTTGCCCGTCAACGTCTTGAC 3872 Query 118727 AAAAATCTGCAT 118738 || |||||||| Sbjct 3871 GAAGATCTGCAT 3860 Score = 100 bits (110), Expect = 2e-16 Identities = 145/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594 ||||| ||| ||| || ||||||||||| || | ||| || |||||||| || Sbjct 4859 GTGGAGCGTACTCTCCTTCTGAATGTTGTAGTCAGAGAGAGTACGACCGTCCTCGAGTTG 4800 Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654 || |||||| |||| || ||||| || |||||||| || ||||||||||| ||| || Sbjct 4799 CTTGCCAGCGAAGATCAGTCGCTGTTGGTCGGGAGGGATACCCTCCTTGTCCTGAATCTT 4740 Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714 || || | |||| |||||| | ||| ||||||| ||| | || || || || Sbjct 4739 GGCCTTGACGTTATCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTACCCGT 4680 Query 118715 CAGAGTTTTTACAAAAATCTGCATG 118739 || || || || || || |||||| Sbjct 4679 CAACGTCTTGACGAAGATTTGCATG 4655 >seq105 Length=629 Score = 125 bits (138), Expect = 6e-24 Identities = 146/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 |||||||| || || ||||||||||| | ||| || |||||||||||| |||||| Sbjct 348 GTAGACTCCTTCTGGATGTTGTAATCAGAGAGAGTCCGGCCATCCTCGAGCTGCTTTCCA 289 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 ||| |||||||||| || ||||| || || ||||||||||||||| || || || Sbjct 288 GCGAAGATGAGACGTTGTTGATCTGGGGGAATGCCCTCCTTGTCTTGGATCTTCGCCTTC 229 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | || | ||||| | ||||||||| | ||| | ||| ||||| || ||||| Sbjct 228 ACATTGTCAATAGTGTCGGACGACTCGACCTCCAAGGTGATCGTCTTGCCCGTGAGAGTC 169 Query 118722 TTTACAAAAATCTGCAT 118738 || || || || ||||| Sbjct 168 TTAACGAAGATTTGCAT 152 Score = 104 bits (114), Expect = 2e-17 Identities = 152/212 (72%), Gaps = 5/212 (2%) Strand=Plus/Minus Query 118530 ACCAAG-TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGT--ATCC 118586 |||||| || | ||| ||| |||||||||||||| ||| | |||| ||| ||| Sbjct 589 ACCAAGGTGAAGCGTACTCTCCTTTTGAATGTTGTAGTCG--GAGAGTGTACGTCCATCT 532 Query 118587 TCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCT 118646 ||||| || || |||||| |||| ||||| ||||| ||||| || || || ||||||||| Sbjct 531 TCGAGTTGCTTGCCAGCGAAGATCAGACGTTGCTGGTCGGGTGGGATTCCTTCCTTGTCT 472 Query 118647 GTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTT 118706 ||||| || || | || | ||||| | ||||||||| | || | ||| Sbjct 471 TGGATTTTCGCCTTCACGTTGTCAATCGTGTCGGAAGACTCGACCTCCAACGTAATGGTT 412 Query 118707 TTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || || || || || || ||||| |||||||| Sbjct 411 TTCCCTGTGAGCGTCTTGACAAAGATCTGCAT 380 >seq3402 Length=1793 Score = 98.7 bits (108), Expect = 9e-16 Identities = 84/104 (81%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||| | || ||||| ||||| |||||||||||||| | |||||| ||||||| Sbjct 1398 ACCAAGTGAAGGGTCGACTCCTTTTGGATGTTGTAATCGCTGAGAGTGCGACCATCCTCG 1457 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTAT 118633 ||||| || || ||| |||| || |||||||| ||||| || || Sbjct 1458 AGCTGCTTGCCCGCGAAGATCAGTCGCTGCTGGTCGGGGGGGAT 1501 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433775681649508