Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinus_20polychrous_20[genbank_20GCA_5F000787475.1_202014-11-26] 10,349 sequences; 38,054,542 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq1988 120 2e-22 seq105 111 1e-19 >seq1988 Length=7662 Score = 120 bits (132), Expect = 2e-22 Identities = 150/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 34184 AGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAAC 34243 ||||||| ||||| || ||||| |||||||| ||||| || || | || || | | Sbjct 4293 AGGTGTAGGGTACTCTCCTTCTGGATGTTGTAATCGGAGAGGGTGCGACCATCCTCAAGC 4234 Query 34244 TGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATC 34303 |||||||| ||||| ||||| ||||||||||| || | | ||||||||| ||| Sbjct 4233 TGCTTGCCAGCGAAGATGAGACGCTGCTGGTCTGGCGGAATACCCTCCTTGTCCTGGATC 4174 Query 34304 TTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCG 34363 ||| ||| | | | | |||| || | ||| ||||| || | |||||||| || ||| Sbjct 4173 TTTGCCTTGACGTTGTCGATCGTGTCAGACGACTCGACCTCAAGAGTGATGGTCTTTCCG 4114 Query 34364 GTGAGAGTTTTCACAAAGATCTGCAT 34389 || | ||| || || ||||||||||| Sbjct 4113 GTCAAAGTCTTGACGAAGATCTGCAT 4088 Score = 113 bits (124), Expect = 3e-20 Identities = 151/209 (72%), Gaps = 2/209 (1%) Strand=Plus/Minus Query 34193 GTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCT 34252 || || || ||||| || ||||| || || || ||| | || || | ||||||||| Sbjct 3771 GTGCTCTCCTTCTGGATATTGTAATCCGAGAGAGTGCGGCCATCTTCGAGCTGCTTGCCG 3712 Query 34253 GCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTT 34312 ||||| ||||| |||||||||||| || | | ||||||||| |||||| ||| Sbjct 3711 GCGAAGATGAGACGCTGCTGGTCGGGTGGAATACCCTCCTTGTCTTGGATCTTTGCCTTG 3652 Query 34313 AGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTT 34372 | | | | || | ||||| || ||||| || | ||||||||| ||||| || || || Sbjct 3651 ACGTTGTCAATGGTATCGGAGGACTCGACCTCGAGCGTGATGGTCTTGCCAGTCAGGGTC 3592 Query 34373 TTCACAAAGATCTGCAT--CGCTCGAATG 34399 || || ||||||||||| | ||||||| Sbjct 3591 TTTACGAAGATCTGCATGACTATCGAATG 3563 Score = 102 bits (112), Expect = 5e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| || ||||| || ||||| ||| | || || | ||||| || || || Sbjct 4560 TCCTTCTGGATATTGTAATCCGACAGGGTGCGGCCATCCTCAAGTTGCTTACCGGCAAAG 4501 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 ||||| || || ||||| || | || ||||||||| |||||| ||| | || | Sbjct 4500 ATGAGACGTTGTTGGTCAGGAGGAATGCCCTCCTTGTCTTGAATCTTTGCCTTAACATTG 4441 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378 | || | ||| | || ||||| |||| |||||||| |||||||| | ||| ||||| Sbjct 4440 TCGATGGTATCAGAAGACTCGACCTCCAGGGTGATGGTCTTGCCGGTCAAAGTCTTCACG 4381 Query 34379 AAGATCTGCAT 34389 ||||||||||| Sbjct 4380 AAGATCTGCAT 4370 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221 ||| || ||||| | || || ||||| | || || || ||||| ||||||||||| || Sbjct 4087 TCCTCCACGCAGACGAAGAACGAGGTGAAGGGTGCTCTCCTTCTGAATGTTGTAGTCAGA 4028 Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281 || ||| | || || | |||||| || || || || | || |||||||| || Sbjct 4027 AAGGGTGCGGCCATCCTCGAGCTGCTTTCCAGCAAAGATCAAACGTTGCTGGTCAGGAGG 3968 Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341 | || ||||||||| ||||| ||| | || | | |||| || | || ||||| Sbjct 3967 AATGCCCTCCTTGTCCTGGATCTTAGCCTTGACATTGTCGATCGTGTCAGAGGACTCGAC 3908 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | ||||| || ||||| || | || || || ||||||||||| Sbjct 3907 TTCGAGGGTGATCGTCTTGCCCGTCAACGTCTTGACGAAGATCTGCAT 3860 >seq105 Length=629 Score = 111 bits (122), Expect = 1e-19 Identities = 148/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 34184 AGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAAC 34243 ||||| | ||||| || || || |||||||||||||| || ||| | || || | Sbjct 585 AGGTGAAGCGTACTCTCCTTTTGAATGTTGTAGTCGGAGAGTGTACGTCCATCTTCGAGT 526 Query 34244 TGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATC 34303 |||||||| ||||| || || || ||||||||| || | | |||||||| || Sbjct 525 TGCTTGCCAGCGAAGATCAGACGTTGCTGGTCGGGTGGGATTCCTTCCTTGTCTTGGATT 466 Query 34304 TTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCG 34363 || ||| | | | | |||| |||| || ||||| |||| ||| |||||||| || Sbjct 465 TTCGCCTTCACGTTGTCAATCGTGTCGGAAGACTCGACCTCCAACGTAATGGTTTTCCCT 406 Query 34364 GTGAGAGTTTTCACAAAGATCTGCAT 34389 ||||| || || |||||||||||||| Sbjct 405 GTGAGCGTCTTGACAAAGATCTGCAT 380 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323031251433440