Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinus_20polychrous_20[genbank_20GCA_5F000787475.1_202014-11-26] 10,349 sequences; 38,054,542 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq2980 140 3e-28 >seq2980 Length=15283 Score = 140 bits (154), Expect = 3e-28 Identities = 367/558 (66%), Gaps = 3/558 (1%) Strand=Plus/Plus Query 16234 ACAAGCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAG 16293 ||||||||||||| |||||| || ||||| ||||| || | ||| || || | || || Sbjct 11962 ACAAGCAAAATCAGTATGCAACCCCTCGTCTCTACTGATCAGCTCATTCGAGTACGTCAG 12021 Query 16294 ACCTGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAA 16353 |||||||| || || | ||||| | |||||| || || || || | ||||||||||| Sbjct 12022 TCCTGGCATGAGGCCCCTCTTTTTCAACCAAAAAATCGCCGCGAAACAGCCAGAAAAGAA 12081 Query 16354 TATACCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGTTCTAtttttactttc 16413 ||| ||||| || || ||||| || || | || || || |||| | || | | Sbjct 12082 TATGCCTTCTACCGCTGCAAAGGCGACGAGACGTTCTGCGAACGTAGACTGTTGATCTGA 12141 Query 16414 tatccattttttagcccaatttgctttttgtttAACACAGTTCATGTTCTCTATTGCATT 16473 |||||| |||||| | || || | | | |||| || |||| || || | Sbjct 12142 TATCCACCGAAGAGCCCACTCGGCCTTCTTCTGGATACAGGGAATAGTCTCGATAGCGTC 12201 Query 16474 AAATAAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATACAT 16533 ||||| || | | | ||| ||| || || ||||| || || | ||| | Sbjct 12202 GAATAAGTATTCTCGCTGCTTGACGTCTTGGATGTAGGTATCAATGAGGAGGGAGTACGT 12261 Query 16534 TTCTGAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATAT 16593 |||||||| || |||||||| || || || || || ||||| | |||||| | | Sbjct 12262 CTCTGAATGGATGTTCTCCATCATGATTTGGAAGCCGTAGAAGCAACGAGCTTCAGCTGC 12321 Query 16594 TTGTACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGC 16653 || || || | || | ||| | | ||| ||||| || || |||||| | || Sbjct 12322 CTGCACCTCGTTCGAGAATCGTTCGACGAGGTTCTCGTTGACGATCCCATCGGAGCCAGC 12381 Query 16654 AAAAAACGCAAGTATGTGTTTAATAAAAtttttttCGTTATC--TGA-AAGTTTTAACCA 16710 || || || |||| ||| || |||| ||||||||| | | | | | ||| Sbjct 12382 GAAGAAGGCGAGTACGTGCGAGATGAAATGACGTTCGTTATCGTTCAGACGGGTGTGCCA 12441 Query 16711 GTCAGAAAAATCTTTTGATAAATCGACCTCTTCTACAGTCCAAAAAGAAGCAACAGCCTT 16770 ||| | ||| | || | |||| |||||| | ||||| || ||||| | ||||| Sbjct 12442 GTCTACCAGATCGTGCGAGAGGTCGATCTCTTCGGCTGTCCAGAATGAAGCCTCTGCCTT 12501 Query 16771 TTTATACATTTTCCATAT 16788 ||||||||||| ||| || Sbjct 12502 TTTATACATTTGCCAAAT 12519 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462452168291400