Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinus_20polychrous_20[genbank_20GCA_5F000787475.1_202014-11-26] 10,349 sequences; 38,054,542 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq1347 98.7 2e-15 >seq1347 Length=113524 Score = 98.7 bits (108), Expect = 2e-15 Identities = 182/267 (68%), Gaps = 0/267 (0%) Strand=Plus/Plus Query 248832 TTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAGATCGTGGAACGAAT 248891 ||||||||| || ||| || ||||||||||| || ||||||||| | || | Sbjct 31380 TTTCAAAACTCTTGAGCGGTCATATCTCCTCAAGATCAATGGCAAGACTGCTGAGAGGCC 31439 Query 248892 TCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGACATAGAGAGCGTGCT 248951 |||||| || |||||||||| |||||||| || || | |||||| || ||| | | Sbjct 31440 CCAGCACCTGCTGATGCGAGTAGCTGTCGGAATCCATGGTGCTGACATTGACCGCGCGAT 31499 Query 248952 CGAGACGTACACCGGAATGAGTGAACGCTGGATGACACATGCCACACCGACGCTCTTCAA 249011 ||||| |||| ||| ||| || | | || || || | ||||| | ||||| Sbjct 31500 TGAGACATACAATTTGATGTCTGAGCGGTATTTCACTCACGCATCTCCGACCTTGTTCAA 31559 Query 249012 CGCCGGTACCGTCAACAATCAGCTGAGCTCGTGCTTTCTTCTTGCCATGCAAGACGACTC 249071 ||||| || |||| |||| ||||||| ||||| || | |||| | || ||||| Sbjct 31560 TGCCGGCACACCCAACCCTCAGTTGAGCTCATGCTTCCTGGTCTGCATGAAGGATGACTC 31619 Query 249072 TGTCGACGGCATTTATGACACGCTTAA 249098 | || || || || || || || || Sbjct 31620 AATTGAGGGTATCTACGATACCCTGAA 31646 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073624022266432