Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinus_20polychrous_20[genbank_20GCA_5F000787475.1_202014-11-26] 10,349 sequences; 38,054,542 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq176 201 1e-46 seq2980 199 4e-46 seq1347 136 4e-27 seq1988 96.9 3e-15 seq105 84.2 2e-11 >seq176 Length=24199 Score = 201 bits (222), Expect = 1e-46 Identities = 392/575 (68%), Gaps = 7/575 (1%) Strand=Plus/Plus Query 57570 ATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTG 57629 || ||| | |||||||| || || ||||| || || ||||| | ||||| | |||||| Sbjct 19330 ATCTGGCAAATGTACAAGAAAGCCGAAGCGTCATTCTGGACAGCGGAAGAGATGGACCTG 19389 Query 57630 TCTAAGGATCTGAGCGATTGGGATTCCC---TCAAAGAATCTGAGAGAAATTTTATTAAA 57686 || || ||| || ||| ||| | || | || || ||| | |||| || Sbjct 19390 TCGAAAGATATGCACGACTGGCAACACCGGTTGAACGACAACGAGCGCCATTTCATCTCT 19449 Query 57687 CACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGA 57746 || || | || || ||||| || || || |||||||| ||||||||| | || ||| | Sbjct 19450 CATGTTCTTGCTTTCTTCGCGGCTTCGGACGGTATTGTCAACGAGAATCTCGTTGAACGG 19509 Query 57747 TTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATT 57806 || || | ||||| |||| | ||||| | ||||| || || || ||| | || Sbjct 19510 TTCTCCAACGAAGTCCAAGCAGCTGAGGCCCGCTGCTTCTATGGCTTCCAAATCATGATG 19569 Query 57807 GAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACGAC 57866 || ||| | || || || | |||||| || ||||||||||||||| | || ||| | ||| Sbjct 19570 GAGAACATTCACTCCGAGACGTATTCCCTCCTCATCGATACGTACATCAAAGACCA-GAC 19628 Query 57867 GAGAAACGTAGA--CTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGCAG 57924 || | || || ||| |||| |||||||| || || ||| |||||||| | Sbjct 19629 CC-AACGGGAGCATCTCTTCGACGCCATCGAAACGATTCCTTGCATCAAGAAGAAGGCTG 19687 Query 57925 AGTGGTCAATCAAATGGATAAAAAGCGCCACGGCCACGTTCGCCGAGAGGCTAATCGCGT 57984 | ||| | | ||||| | | | | || |||||||||| | || | || | Sbjct 19688 ACTGGGCTTTACGCTGGATCTCAGACAAGAAGTCCGCGTTCGCCGAACGACTCGTTGCCT 19747 Query 57985 TCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGAAGA 58044 | || || || ||||| || ||||| |||||| |||||| | || || ||| | |||| Sbjct 19748 TTGCTGCGGTTGAAGGAATCTTCTTCTCGGGCTCGTTTGCGTCCATCTTCTGGCTCAAGA 19807 Query 58045 AACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGTC 58104 | | || || ||||| ||| ||||||| ||| || |||| ||||||||||| Sbjct 19808 AGAGAGGTCTCATGCCTGGCTTGACGTTCTCCAATGAACTGATCAGCCGCGACGAGGGCA 19867 Query 58105 TCCATACTGATTTTGCGTGCCTAATGTACTCTCAC 58139 | |||||||| || |||||||| ||| ||||||| Sbjct 19868 TGCATACTGACTTCGCGTGCCTCCTGTTCTCTCAC 19902 >seq2980 Length=15283 Score = 199 bits (220), Expect = 4e-46 Identities = 385/563 (68%), Gaps = 15/563 (3%) Strand=Plus/Minus Query 57570 ATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTG 57629 |||||| | ||||| ||||||||||| || || || ||||| | |||||| | ||||| Sbjct 12519 ATTTGGCAAATGTATAAAAAGGCAGAGGCTTCATTCTGGACAGCCGAAGAGATCGACCTC 12460 Query 57630 TCTAAGGATCTGAGCGATTGGGATTCCC---TCAAAGAATCTGAGAGAAATTTTATTAAA 57686 || | |||||| || ||| | ||| | || || || | |||| || Sbjct 12459 TCGCACGATCTGGTAGACTGGCACACCCGTCTGAACGATAACGAACGTCATTTCATCTCG 12400 Query 57687 CACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGA 57746 ||||| | || || ||||| | |||||||| || || |||||||| | |||||| || Sbjct 12399 CACGTACTCGCCTTCTTCGCTGGCTCCGATGGGATCGTCAACGAGAACCTCGTCGAACGA 12340 Query 57747 TTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATT 57806 || || | || ||||| | | || || | ||||| ||||| || ||| | || Sbjct 12339 TTCTCGAACGAGGTGCAGGCAGCTGAAGCTCGTTGCTTCTACGGCTTCCAAATCATGATG 12280 Query 57807 GAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACGA- 57865 || ||| | |||||||| | ||| || || ||||| ||||| ||| | | ||| | | Sbjct 12279 GAGAACATCCATTCAGAGACGTACTCCCTCCTCATTGATACCTACATCCAAGACGTCAAG 12220 Query 57866 ---CGAGAA-ACGTAGACTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGG 57921 |||||| || || ||| |||| ||||| || || ||| ||| ||||||| Sbjct 12219 CAGCGAGAATACTTA-----TTCGACGCTATCGAGACTATTCCCTGTATCCAGAAGAAGG 12165 Query 57922 CAGAGTGGTCAATCAAATGGATAAAAAGCGCCACGGCC-ACGTTCGCCGAGAGGCTAATC 57980 | |||||| | | |||||| | | | || | | |||||||| || | || || Sbjct 12164 CCGAGTGGGCTCTTCGGTGGATATCA-GATCAACAGTCTACGTTCGCAGAACGTCTCGTC 12106 Query 57981 GCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATG 58040 || || || || || ||||| ||||||||||| ||| | || ||||| || |||||| || Sbjct 12105 GCCTTTGCAGCGGTAGAAGGCATATTCTTTTCTGGCTGTTTCGCGGCGATTTTTTGGTTG 12046 Query 58041 AAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAG 58100 || || | ||||| ||||| || ||||||| || ||| |||| | |||||| Sbjct 12045 AAAAAGAGGGGCCTCATGCCAGGACTGACGTACTCGAATGAGCTGATCAGTAGAGACGAG 11986 Query 58101 GGTCTCCATACTGATTTTGCGTG 58123 || | |||||||||||||| || Sbjct 11985 GGGTTGCATACTGATTTTGCTTG 11963 Score = 165 bits (182), Expect = 7e-36 Identities = 379/565 (67%), Gaps = 17/565 (3%) Strand=Plus/Plus Query 57570 ATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTG 57629 || ||| | ||||| || ||||| ||||| || || ||||| | || || | || || Sbjct 13977 ATCTGGCAAATGTATAAGAAGGCTGAAGCGTCCTTCTGGACTGCTGAGGAGATGGATTTG 14036 Query 57630 TCTAAGGATCTGAGCGATTGGGATTCC---CTCAAAGAATCTGAGAGAAATTTTATTAAA 57686 || ||||| || ||| ||||| | ||||| || ||| | | || || | Sbjct 14037 TCGAAGGACCTCCACGACTGGGACAACAGACTCAACGACAATGAACGTCACTTCATCTCA 14096 Query 57687 CACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGA 57746 ||||| | || || || || || || ||||||||||| |||||||| | ||||| | Sbjct 14097 CACGTCCTCGCCTTCTTTGCTGCCTCGGATGGTATTGTCAACGAGAACCTCGTCGAGCGG 14156 Query 57747 TTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATT 57806 || || | || || |||| | || || | ||||| ||||| || ||| | || Sbjct 14157 TTCTCCAACGAGGTTCAAGCAGCTGAAGCTCGTTGCTTCTACGGCTTCCAAATCATGATG 14216 Query 57807 GAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACGAC 57866 || ||| | |||||||| | || || || |||||||| || ||| | |||||| | | Sbjct 14217 GAGAACATCCATTCAGAGACATACTCCCTTCTCATCGACACATACATCAAGGACC-CTA- 14274 Query 57867 GAGAAACGT-AGA--CTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGCA 57923 || |||| || || ||| | || ||||| || || || ||| |||||||| Sbjct 14275 -AGCAACGCGAGCACCTCTTCGATGCTATCGAGACCATTCCTTGCATCAAGAAGAAGGCT 14333 Query 57924 GAGTGGTCAATCAAATGGATA----AAAAGCGCCACGGCCACGTTCGCCGAGAGGCTAAT 57979 || ||| | | ||||| | ||| | | | ||| ||||| | || | Sbjct 14334 GACTGGGCCTTGCGCTGGATCTCGGACAAGAACTCTG----CATTCTCCGAGCGTCTTGT 14389 Query 57980 CGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGAT 58039 |||||||||||||||||| ||||| ||||| || ||| || || | || |||||| | Sbjct 14390 CGCGTTCGCCGCCGTCGAGGGTATCTTCTTCTCCGGCTCTTTCGCATCTATCTTTTGGTT 14449 Query 58040 GAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGA 58099 |||||| || || ||||||| ||| |||| || || |||||||| || ||||| Sbjct 14450 GAAGAAGCGTGGTTTGATGCCTGGCTTGACCTTCTCGAATGAGTTGATCAGCCGTGACGA 14509 Query 58100 GGGTCTCCATACTGATTTTGCGTGC 58124 ||| | ||||| || ||||| ||| Sbjct 14510 GGGCATGCATACCGACTTTGCTTGC 14534 >seq1347 Length=113524 Score = 136 bits (150), Expect = 4e-27 Identities = 260/376 (69%), Gaps = 9/376 (2%) Strand=Plus/Minus Query 22505 GTGAACGGTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATC 22564 ||| | ||||| || | || ||| |||| |||||| ||| |||||||| ||||| Sbjct 32984 GTGTAGGGTTCAAAGCACTCGTTGAAGCCCAAGATCTGACTGGTAGAAGCGGTAGGCATG 32925 Query 22565 GGCGCCAACAGTAGCGAGTTTCTCAAGCCGTGCTTTGAAATTTTACTCTTGA-GC-ATCG 22622 || || | || || ||||| || | |||| | ||| | || ||| | || ||| Sbjct 32924 GGTGCAAGCAACAGGGAGTTCCTGATGCCGGTCCTTGCGACCTTCTCCTTCAAGCTATC- 32866 Query 22623 ACCAGTCCCACAGATCGGACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCCGC 22682 ||||||||| ||||| | || || ||| ||||||| ||||| || || | ||| | Sbjct 32865 -CCAGTCCCAGAGATCCGTAGGAGTAACAC---CCCACATGTCGTACTGGAAGATGCCCC 32810 Query 22683 GACTCGCCGGGCTGCCTTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGC 22742 || | || |||||||||||||| ||||| ||||||| || ||||||| || | || Sbjct 32809 TGCTGACAGGACTGCCTTCGTACGTCTCGTAAGGACCATCCCTCTCGGCAAGATCACTGC 32750 Query 22743 TCGCCTCCAACGCGCCGTAATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCG-GCG 22801 | || || | || ||| ||| |||||||||||||| | |||||| | | | || || Sbjct 32749 TGGCGTCGAGAGCAGCGTGATAGATAGTCTCGAAGATCTGCTTGTTGAGGT-GACGCGCC 32691 Query 22802 GCGACGCTTTCGTACGGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCT 22861 || ||| |||||| || | |||| ||||||||| || | ||| | || || Sbjct 32690 TCGGGAGAGTCGAACGGCAGCCGAAGGATCATGAACGCGTCAGCGAGACCGTTCACACCG 32631 Query 22862 ATACCGATCGGTCGGT 22877 || || || || |||| Sbjct 32630 ATGCCAATGGGACGGT 32615 Score = 104 bits (114), Expect = 2e-17 Identities = 228/342 (67%), Gaps = 0/342 (0%) Strand=Plus/Minus Query 23594 CCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCATC 23653 ||| | || |||| |||||| | | ||||| || || || | | || |||||| Sbjct 31715 CCTGTAGCGCGAATGTTGTGGATGCTCAAACCAATACCACCAGCGGTCTTGCTGATCATC 31656 Query 23654 GCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAG 23713 ||||| | ||||| || |||||||| ||||| || ||| || || | ||||| | Sbjct 31655 GCGCAGTTCTTCAGGGTATCGTAGATACCCTCAATTGAGTCATCCTTCATGCAGACCAGG 31596 Query 23714 AAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGC 23773 || || || || || | ||||| || |||| ||||| ||||| ||||| Sbjct 31595 AAGCATGAGCTCAACTGAGGGTTGGGTGTGCCGGCATTGAACAAGGTCGGAGATGCGTGA 31536 Query 23774 GTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTCCG 23833 || || || | | ||||| | |||||| || || || ||| |||||||| | || Sbjct 31535 GTGAAATACCGCTCAGACATCAAATTGTATGTCTCAATCGCGCGGTCAATGTCAGCACCA 31476 Query 23834 TGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGACCGTGACGCCGTTA 23893 || || |||| || || ||||||| || || || || ||||| | || ||| || Sbjct 31475 TGGATTCCGACAGCTACTCGCATCAGCAGGTGCTGGGGCCTCTCAGCAGTCTTGCCATTG 31416 Query 23894 ATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAA 23935 || |||| |||||||| || | | ||||| || || ||| Sbjct 31415 ATCTTGAGGAGATATGACCGCTCAAGAGTTTTGAAACCGAAA 31374 Score = 102 bits (112), Expect = 7e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 23357 AAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCG 23416 ||||| || | | ||||| ||||||||||| ||||| || || ||||||||||| ||| Sbjct 32008 AAAAGGTCGGAAACCCATAATGCGTAGAACAGGTCGCGAGCACGAACCTCCTCTTTACCG 31949 Query 23417 GTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACG 23476 |||||| | || | || || || | || || ||||| ||||| ||||| | | Sbjct 31948 TGGTTCTTACGAAGGTCAAGGAACTCGAAGATATCAGCGTGCCAAGGCTCAAGGTAGATG 31889 Query 23477 GCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTAC 23536 ||||| || || || | ||| ||||| || || ||||| || || || || | ||| Sbjct 31888 GCAAAGGCACCGGGACGCTTGTTGCCACCTTGGTCGACATACCGAGCGGTTGCATCATAC 31829 Query 23537 ACTCTTAGCATCGGCACGAGACCGTTGGA 23565 | | ||||| ||||| | |||||| || Sbjct 31828 GCACGAAGCATAGGCACAATACCGTTCGA 31800 >seq1988 Length=7662 Score = 96.9 bits (106), Expect = 3e-15 Identities = 117/157 (75%), Gaps = 2/157 (1%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||||||||| ||||| ||||| || ||||| |||| || || | || Sbjct 3574 CATGCAGATCTTCGTAAAGACCCTGACTGGCAAGACCATCACGCTCGAGGTCGAGTCCTC 3633 Query 31252 CGACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACC 31310 ||| | | || | ||||| || ||| | |||||||| || | || ||||||| Sbjct 3634 CGATACCATTGACAACGTCAAGGCAAAGA-TCCAAGACAAGGAGGGTATTCCACCCGACC 3692 Query 31311 AGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347 |||||||||| || ||||| ||||| ||| | ||||| Sbjct 3693 AGCAGCGTCTCATCTTCGCCGGCAAGCAGCTCGAAGA 3729 Score = 95.1 bits (104), Expect = 1e-14 Identities = 116/156 (74%), Gaps = 2/156 (1%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| |||||| |||| || || || ||||| | || || || |||| Sbjct 4088 ATGCAGATCTTCGTCAAGACTTTGACCGGAAAGACCATCACTCTTGAGGTCGAGTCGTCT 4147 Query 31253 GACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||| | ||||| || ||| | ||||||||| || | ||||| ||||| Sbjct 4148 GACACGATCGACAACGTCAAGGCAAAGA-TCCAGGACAAGGAGGGTATTCCGCCAGACCA 4206 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347 ||||||||| || ||||||||||| ||| | || || Sbjct 4207 GCAGCGTCTCATCTTCGCTGGCAAGCAGCTTGAGGA 4242 Score = 89.7 bits (98), Expect = 5e-13 Identities = 108/147 (73%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 ||||||||| ||||| ||||| |||| || || || |||||| |||| || || | || Sbjct 4655 CATGCAAATCTTCGTCAAGACGTTGACGGGTAAGACTATCACCCTCGAGGTGGAGTCTTC 4714 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||||| |||| | ||||| | || ||||||||| || | || |||||||| Sbjct 4715 CGACACCATCGATAACGTCAAGGCCAAGATTCAGGACAAGGAGGGTATCCCTCCCGACCA 4774 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACA 31338 ||||| || || ||||||||||| || Sbjct 4775 ACAGCGACTGATCTTCGCTGGCAAGCA 4801 >seq105 Length=629 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/212 (70%), Gaps = 3/212 (1%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || ||||| || ||||| ||||| || || | || || || | ||| Sbjct 380 ATGCAGATCTTTGTCAAGACGCTCACAGGGAAAACCATTACGTTGGAGGTCGAGTCTTCC 439 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | || || || ||| ||||||||||| | || ||||||||| Sbjct 440 GACACGATTGACAACGTGAAGGCGAAAATCCAAGACAAGGAAGGAATCCCACCCGACCAG 499 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATAA 31371 || ||||| || ||||||||||| || | ||||| | | | || | ||| || || Sbjct 500 CAACGTCTGATCTTCGCTGGCAAGCAACTCGAAGA-TGGACGTACACTCTCCGACTACAA 558 Query 31372 CATTCAAAAAGAATCGACTCTTCATC-TGGTA 31402 ||||||||| || || ||||| | ||||| Sbjct 559 CATTCAAAAGGAGAGTACGCTTCACCTTGGTA 590 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445708734544080