Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinus_20polychrous_20[genbank_20GCA_5F000787475.1_202014-11-26] 10,349 sequences; 38,054,542 total letters Query= NC_003278.1 Length=35580 Score E Sequences producing significant alignments: (Bits) Value seq9209 219 1e-52 seq10129 113 1e-20 >seq9209 Length=729 Score = 219 bits (242), Expect = 1e-52 Identities = 403/576 (70%), Gaps = 46/576 (8%) Strand=Plus/Minus Query 3272 GCTGCAGG-GCGTCATGACTTACGTCGATCTTGATGCGATCGGCGGCCGGCTT--GCC-C 3327 || ||||| ||| |||| || ||||||||| || ||| || | | ||| ||| | Sbjct 726 GCCGCAGGCGCGGCATGGCTGACGTCGATCGAGACGCGCTCTTC---CTTCTTCCGCCGC 670 Query 3328 TTGTTGAAGCGCTCGCCAGTCCAGAATGTGTAGGCCTCATGCGCCATCGAACTGG---GC 3384 |||| ||||||||| |||||| | | ||||| |||||||| || |||| || Sbjct 669 CGGTTGCGGCGCTCGCCGGTCCAGTAGGGATAGGCAGGATGCGCCA-CG--CTGGACGGC 613 Query 3385 GTCGAGAAGTAGGTCCGGCGGTAGCGCTTCTGCATCGCCATACCGCTGGCGACCTTGTTC 3444 |||||||||||||| ||| | ||| || ||||||| || ||||||||||||| Sbjct 612 GTCGAGAAGTAGGTTTTGCGCCACTTCTTGTGGGTCGCCATGCCCGAGGCGACCTTGTTC 553 Query 3445 AGCTCCTTGAACT--TGAACGTCCAGAAGAACTCGTCGAAGTAGAAGTTGCCGTGGTAGC 3502 || |||| |||| || || ||||||||| |||||||| ||||| ||||||||| || Sbjct 552 AGTTCCTCGAACGAGTGGAC--CCAGAAGAATTCGTCGAAATAGAAATTGCCGTGGCGGC 495 Query 3503 CCTGGGCAGTCCGCGCGTTGGTGCCGAGGAAGTGCAATTCCG-CGCCG--------TTCG 3553 |||| || || || |||||||||||||||||||| ||| | ||||| | || Sbjct 494 CCTGCGCCGTGCGGAAGTTGGTGCCGAGGAAGTGCAGTTCGGCCGCCGCCTCTTCCTCCG 435 Query 3554 GCAGGATGATCG-GGTCGCC--CTTCAGTTCGACACCTACCGCATCGCGC---------G 3601 || | | | || ||| | | || | ||| | || | || ||| | | Sbjct 434 GCCGCAGGTCCGAGGTGATCAGCATCGGATCGCCGCCCAGCGTCACGCCCACCAGCTTGG 375 Query 3602 CGAAGGCCTG--GATATACGCCTTGAAGATGTGCGCTTGGGCCTTGCTGGCCGACAGGAA 3659 ||||| ||| ||| || ||| |||||| ||||| || ||||||||||| Sbjct 374 CGAAG--CTGACGATGTAGCTGCGGAACTGGTGCGCCTGGGCTTTCGATGCCGACAGGAA 317 Query 3660 TATCTGGTTGCGCCCCGTTTCCAGCGCGTCGATCAGCGCCTCGCGGGCGAAGTAGAACGT 3719 |||||||| || || || || | |||||||||||| || ||| |||||||||| | || Sbjct 316 GATCTGGTTACGGCCGGTCTCGATCGCGTCGATCAGGGCTTCGAAGGCGAAGTAGTAGGT 257 Query 3720 GGCGCCGATCTGCCGCGACTTGAGAATCACGCGGGTTCGCTGATTACCCGCGCGGT--AC 3777 ||||||||||| || ||||| || |||| |||||| ||||| | | ||||| | || Sbjct 256 CGCGCCGATCTGGCGTGACTTCAGGATCATGCGGGTGCGCTGGCT--CAGCGCGTTCCAC 199 Query 3778 CAGTCTTTCTGGTAGTCGAAGCAACCGTCGAGGAAG 3813 ||| |||||||||| || || || |||||| Sbjct 198 CAGGTCAGCTGGTAGTCGTAGAGGCCCTCAAGGAAG 163 >seq10129 Length=874 Score = 113 bits (124), Expect = 1e-20 Identities = 146/199 (73%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 29567 CTGTGGACCTGCTTCGGCGCCAAGGGCCTGGTGGCGCTGGCATTCTGGTTCGGCTCGCTG 29626 ||||||||| || |||| |||||||| | |||||||| || |||| | ||||| Sbjct 112 CTGTGGACCGCCTACGGCCCCAAGGGCTTCGTGGCGCTCGCCTTCTTCACCATGTCGCTT 171 Query 29627 TTCGCGGAGCAGATCCGCG-CCGAGTTCCAGTCCTTTCCGTTCCTCGAGGCCACCGGCGA 29685 ||| ||| |||||||||| ||| | | | || | |||||||| ||||||| Sbjct 172 TTCTCGGTGCAGATCCGCAACCGCGA-CGACTCGCTCGGCTTCCTCGAAATCACCGGCCT 230 Query 29686 GGCCGGTGCCGGCAAATCCACGCTGATCACCTTCCTGTGGAAGCTGCTCGGCCGGGCGGA 29745 | |||| ||||||| ||||||||||| ||||| ||||||||||||||||| | | Sbjct 231 GCCCGGCTCCGGCAAGACCACGCTGATCGTGTTCCTCTGGAAGCTGCTCGGCCGCCTGAA 290 Query 29746 CGAGGAAGGCCAGGACCCG 29764 | | |||||| | |||||| Sbjct 291 CCACGAAGGCTACGACCCG 309 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 113720422681996