Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinus_20polychrous_20[genbank_20GCA_5F000787475.1_202014-11-26] 10,349 sequences; 38,054,542 total letters Query= NC_003309.1 Length=53373 Score E Sequences producing significant alignments: (Bits) Value seq7622 901 0.0 seq9353 136 1e-27 >seq7622 Length=2710 Score = 901 bits (998), Expect = 0.0 Identities = 1004/1328 (76%), Gaps = 17/1328 (1%) Strand=Plus/Plus Query 33316 TGAACCGCACCGGGAATCGTGGAGGCTGGTTGGTTTAAGTTAATGCGGACACGTCAGCGG 33375 |||| ||| |||||| ||| |||||||| ||||||||| || | || | ||| |||| Sbjct 1370 TGAATCGCCCCGGGATTCGCGGAGGCTGTTTGGTTTAA-TTCAGGCCGTCACCGTGGCGG 1428 Query 33376 C---ATTTCTGAGTTGTCTGTAGTAGTTTGCCTCAGCTTCAGCGGGCGGGATATAGCCGA 33432 | ||| ||||||| | |||||||||||||||||| || || ||||| || ||||||| Sbjct 1429 CCTGATTGGTGAGTTGCCGGTAGTAGTTTGCCTCAGCCTCTGCCGGCGGTATGTAGCCGA 1488 Query 33433 GCGGTTCCATCAGCCGATGATGGTTGTACCAGGCGACCCATTCCAGCGTTGCCAGTTCGA 33492 || || | ||| ||||| |||||| |||| | ||||||||||| || || | || | Sbjct 1489 TGGGCTCGAGCAGGCGATGGTGGTTGAACCACGACACCCATTCCAGGGTCGCGAACTCCA 1548 Query 33493 CGGATTCCCTCGTTTTCCAAGGGGCGCGCCGATGAATCAGTTCCGTCTTGTACAGGCCGT 33552 | | ||| | || ||||| || ||||| |||||||||| || | |||||| | |||| Sbjct 1549 CCGCCTCCTTGGTCTTCCATGGCGCGCGACGATGAATCAACTCGGCCTTGTAGTGCCCGT 1608 Query 33553 TGATCGTTTCGGCCAGCGCATTGTCGTAGCTGTCGCCCCGGCTGCCGACTGAGGGCTCGA 33612 |||| || ||||||| || ||||| |||||||||||| |||||| || || ||||||| Sbjct 1609 TGATGGTCTCGGCCAAAGCGTTGTCATAGCTGTCGCCCATGCTGCCCACAGATGGCTCGA 1668 Query 33613 TGCCGGCCTCAGCCAGCCGTTCGCTGTAGCGAATGCTGACGTATTGAGACCCCCTGTCGG 33672 |||||||||| |||||||| || ||| |||||||||||||||||| ||||||||||||| Sbjct 1669 TGCCGGCCTCGGCCAGCCGCTCCGTGTTGCGAATGCTGACGTATTGCGACCCCCTGTCGG 1728 Query 33673 AATGATGAATCAAAGTCCCGTCCTCGCCCGGTTGGCGGGCGTACAGCGCTTGTTCAAGTG 33732 | ||| | || | ||||| | || || ||||||||||| || |||| || | Sbjct 1729 AGTGACAGACCAGGCTGCCGTCGCGTTCAGGCTGTCGGGCGTACAGGGCCCGTTCCAGAG 1788 Query 33733 CATCCAGAACAAAGTCCGTGGTCATCGACGAGCTGACCCGCCAGCCAACAATACGGCGGG 33792 |||| || |||||||| ||| ||| || ||| || ||||| || || || || |||| Sbjct 1789 CATCGAGCACAAAGTCAGTGCGCATTGAGCTGCTCACGCGCCAACCCACGATGCGACGGG 1848 Query 33793 CGAACACGTCGATCACGAATGCCACGTACAGCCAGCCTTGCCATGTCGAGACATACGTAA 33852 | |||||||| | ||||| ||||||||||||||||| ||||| |||||||| || || | Sbjct 1849 CAAACACGTCAACGACGAAGGCCACGTACAGCCAGCCCTGCCAGGTCGAGACGTAGGTGA 1908 Query 33853 AATCCGACACCCAGAGCTGATTCGGTCGGTCAGCCTTGAACTGCCGGTTGACTCGGTCCA 33912 | || ||||| ||||| |||||||| || || ||||||||||||||| ||||||| Sbjct 1909 AGTCGCTGACCCATAGCTGGTTCGGTCGATCGGCACGGAACTGCCGGTTGACCCGGTCCA 1968 Query 33913 GCGGGCGCGGCGCGGTCACATCGGTAATCGTCGTGCGAACACGCTTACCGCGAACTGCGC 33972 |||||| ||||| | | || | |||||| | || ||| ||||| | ||| Sbjct 1969 GCGGGCATGGCGCCTTGGCGTCACCGACAGTCGTGTGCACGACCTTGCCGCGCATCACGC 2028 Query 33973 CACGCAAGCCCTGCAGCTT---CATCAACCGTCCGACCGTGCAGCGTGCCACCGTAATGC 34029 | ||| ||||| |||||| |||||| || ||||||||||||| ||||| | | || Sbjct 2029 CGCGC-AGCCC--CAGCTTGCGCATCAAGCGCTCGACCGTGCAGCGAGCCACGCTCACGC 2085 Query 34030 CTTCCCGGTTCATCTGCTTCCAGACCTTCGGCA-CGCCGTAGACCTGCATGTTGGCCTGC 34088 |||| || || || ||| ||||| | || |||||||||||||||||||||||||| Sbjct 2086 CTTCGCGCCCCAGTTGGCGCCACACCTT-GTCAGCGCCGTAGACCTGCATGTTGGCCTGC 2144 Query 34089 CAGACACGCTTGATCTCCGGTTGCAAAAGCTCATCGCGTTTCGCGCGGGCGCAGCGTTTC 34148 || || || | |||| ||| ||| |||||||||| || || | || || | Sbjct 2145 CAAACGCGTTGAATCTGCGGCATCAACTGCTCATCGCGCAGGGCCCGCTCACATCGCCTG 2204 Query 34149 GACGGATCGCGAAGTTGTGCTGCATGGCGTCGGTAGCCCGACGGGGCAATCCGCAAGACC 34208 || || || || | || ||| | | ||| || |||||||||||||| |||||||| Sbjct 2205 TGGGGCTCACGCAGCAGCGCAGCACGTCTTCGATAAGCCGACGGGGCAATCTGCAAGACC 2264 Query 34209 TTGCAGATCGGCTCGACCCCGAAGGTGTCGCGATGCTGATCAATGAAGGCCTTCAGGACT 34268 ||||||| |||||||||||||||||| |||||||||| || |||||| ||||||||||| Sbjct 2265 TTGCAGAGCGGCTCGACCCCGAAGGTATCGCGATGCTTGTCGATGAAGTCCTTCAGGACT 2324 Query 34269 TGAAACGGCGGTCGAGCTCCGCCTGAGCGAAAAACGCGCTCGCCAGTTTGAGAATCTCGT 34328 ||| |||||||||||||||||||| |||||||||||||| || || || | ||||||| Sbjct 2325 TGAGCCGGCGGTCGAGCTCCGCCTGGGCGAAAAACGCGCTGGCAAGCTTCAATATCTCGT 2384 Query 34329 TGGTCCGGCGCAGTTCCTTGACCTCGCGCTCCAAGGCTTTGATGCGTTCACGCTCGGCCG 34388 ||| ||| ||||| ||||||||||||||||||| | | |||| || | |||| | | Sbjct 2385 TGGCCCGACGCAGCTCCTTGACCTCGCGCTCCAGGTCCTTGACCCGCTGGGCCTCGCCGG 2444 Query 34389 TACTCACGCCATCGCGCTCTCCACGGTCGACCTCGTTGCGCTTAACCCAATCCAACAGCG 34448 | | ||||| || ||| | ||| ||| ||||| |||||| ||||| || || | Sbjct 2445 TCGTTACGCCTTCACGCACGCCAGCGTCAACCTCCGCGCGCTTGACCCATTCGTTCAAGG 2504 Query 34449 TCTGCGGCGTGCAGCCGATCATCGGCGCAATCGATTCGACGGCCGCCCACATCGACGGGT 34508 | |||||| ||||| ||| | || ||||| || |||| ||| ||||||| |||||||| Sbjct 2505 TTTGCGGCACACAGCCAATCTTGGGGGCAATGGACTCGATGGCGGCCCACAACGACGGGT 2564 Query 34509 GCTCGCTACGCTGCTCGCGTACCAGGCGCACTGCGCGCTCTCGGACTTCCGGGGAAAAC- 34567 ||| | || ||||| | |||| | ||| || ||||| || || || || || ||| Sbjct 2565 ACTCCCCGCGGTGCTCCTGCACCATCCTCACCGCCCGCTCACGCACCTCGGGTGAGAACT 2624 Query 34568 TGCTTGGCTTCTGTTCATGGCTCCATTCTCTCAGAGT-TGGAGCCTCCAC-AAACTCGGG 34625 || | | |||| |||||||||| || |||||||||| | |||||||| | |||| |||| Sbjct 2625 TGTTCGACTTC--TTCATGGCTCAATCCTCTCAGAGTGTTGAGCCTCCTCAAAACCCGGG 2682 Query 34626 GCGGTTCA 34633 ||| |||| Sbjct 2683 GCGATTCA 2690 Score = 98.7 bits (108), Expect = 3e-16 Identities = 83/101 (82%), Gaps = 1/101 (1%) Strand=Plus/Plus Query 34274 CGGCGGTCGAGCTCCGCCTGAGCGAAAAACGCGCTCGCCAGTTTGAGAATCTCGTTGGTC 34333 |||||| ||||||||||||| | | |||||||||| ||| || ||||| ||||||| | Sbjct 799 CGGCGGGCGAGCTCCGCCTG-GAGGAAAACGCGCTGGCCGTCTTCAGAATGTCGTTGGCC 857 Query 34334 CGGCGCAGTTCCTTGACCTCGCGCTCCAAGGCTTTGATGCG 34374 || |||| ||||||||||||| |||||| |||| ||||| Sbjct 858 CGACGCAATTCCTTGACCTCGGGCTCCAGTTCTTTAATGCG 898 >seq9353 Length=686 Score = 136 bits (150), Expect = 1e-27 Identities = 407/615 (66%), Gaps = 26/615 (4%) Strand=Plus/Plus Query 33758 CGACGAGCTGACCCGCCAGCCAACAATACGGCGGGCGAACACGTCGATCACGAATGCCAC 33817 ||| | ||||||| ||| || |||||||| || || | ||||||||||||| ||||| Sbjct 2 CGAGGTGCTGACCTTCCAACCCACAATACGCCGCGCATAGGCGTCGATCACGAAGGCCAC 61 Query 33818 GTACAGCCAGCCTTGCCATGTCGAGACATACGTAAAATCCGACACCCAGAGCTGATTCGG 33877 ||| | | ||| ||| ||| || ||||| |||||| |||||| | || || Sbjct 62 GTAAACGAAACCTGCCCAGGTCTGCACGTACGTGAAATCCACCACCCACAAGGCGTTGGG 121 Query 33878 TCGGTCAGCCTTGAACTGCCGGTTGACTCGGTCCAGCGGGCGCGGCGCGGTCACATCGGT 33937 ||| | | ||||| ||||||||| ||| ||||||| ||| || | || | | Sbjct 122 CCGGGCGACACGGAACTCCCGGTTGACCTTGTCTAGCGGGCACGGAGCCTTGGGATTGCT 181 Query 33938 AATCGTCGTG-CGAACACGCTTACCGC----GA-ACTGCGCCACGCAAGCCCTGCAGCTT 33991 | ||| ||| || | | ||| || | || || | |||| || || ||| || Sbjct 182 GACCGTGGTGACGGTC-CTCTTGCCCCTCCGGATACCG-GCCAGGC---CCATGCTGCG- 235 Query 33992 CATCAACCGTCCGACCGTGCAGCGTGCCACCGTAATGCCTTCCCGGTTCATCTGCTTCCA 34051 |||||| ||| | |||||||| || | || ||| || || ||| || || | ||| Sbjct 236 CATCAATCGTTCCACCGTGCACTTGGCAATCGAAATACCCTCGCGGCGCAGTTGATGCCA 295 Query 34052 GACCTTCGGCACGCCGTAGA--CCT--GCATGTTGGCCTGCCAGACACGCTTGATCTCCG 34107 |||||| || ||||||||| || || |||| | ||| || |||||||| | | Sbjct 296 GACCTTGCGCGCGCCGTAGAGGCCAAAGC-TGTTCTCGTGC---ACGCGCTTGATATGCT 351 Query 34108 GTTGCAAAAGCTCATCGCGTTTCGCGCGGGCGCAGCGTTTCGACGGATCGCGAAGTTGTG 34167 ||| |||||||| || || || | || | | || || || | | Sbjct 352 CGCGCATGTCGTCATCGCGCCGGGCACGTGCTGAACGCCTGGCGGGGGCGGCCAGACGGG 411 Query 34168 CTGCATGGCGTCGGTAGCCCGACGGGGCAATCCGCAAGACCTTGCAGATCGGCTCGACCC 34227 | ||||| || ||| |||||||| ||| || | |||||||||||||| | Sbjct 412 CAGCATGTTCACGATAGGAGGACGGGGCGATCGCCAGTTCGCGGCAGATCGGCTCGATAC 471 Query 34228 CGAAGGTGTCGCGATGCTGATCAATGAAGGCCTTCAGGACTTGAAACGGCGGTCGAGCTC 34287 | ||| ||||||||| || ||||| | | ||| || | |||||||||||||| Sbjct 472 CCAAGTCCTCGCGATGCGCGTCGATGAACGACATCATCACCTCTCGCGGCGGTCGAGCTC 531 Query 34288 CGCCTGAGCGAAAAACGCGCTCGCCAGTTTG---AGAATCTCGTTGGTCCGGCGCAGTTC 34344 |||| | || ||| |||| ||| ||| || |||||||| | || ||||| || Sbjct 532 CGCCAGCGCAAAATACGCCGATGCC---TTGCGCAGGATCTCGTTCGCGCGCCGCAGCTC 588 Query 34345 CTTGACCTCGCGCTC 34359 ||| ||||||||||| Sbjct 589 CTTTACCTCGCGCTC 603 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 170651025371230