Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinus_20polychrous_20[genbank_20GCA_5F000787475.1_202014-11-26] 10,349 sequences; 38,054,542 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq2980 150 2e-31 seq176 145 1e-29 >seq2980 Length=15283 Score = 150 bits (166), Expect = 2e-31 Identities = 374/563 (66%), Gaps = 10/563 (2%) Strand=Plus/Plus Query 36154 CAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGT 36213 |||||| || ||||| || | |||||||||||||| || | || || || |||| Sbjct 11959 CAAACAAGCAAAATCAGTATGCAACCCCTCGTCTCTACTGATCAGCTCATTCGAGTACGT 12018 Query 36214 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAA 36273 ||||| ||||| ||||| | |||||| | |||||| || | ||| || | |||||||| Sbjct 12019 CAGTCCTGGCATGAGGCCCCTCTTTTTCAACCAAAAAATCGCCGCGAAACAGCCAGAAAA 12078 Query 36274 GAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACTG----T 36329 ||| || |||||||| || |||||||| | || | ||| | ||| |||| | Sbjct 12079 GAATATGCCTTCTACCGCTGCAAAGGCGACGAGACGTTCTGC-GAACGTAGACTGTTGAT 12137 Query 36330 CATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAG 36389 | ||||||| ||||||| ||||||||||| | | ||| || || ||||| |||| Sbjct 12138 CTGATATCCACCGAAGAGCCCACTCGGCCTTCTTCTGGATACAGGGAATAGTCTCGATAG 12197 Query 36390 CATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTAT 36449 | | || | || | | | || |||| | || |||||||| | || | Sbjct 12198 CGTCGAATAAGTATTCTCGCTGCTTGACGTCTTGGATGTAGGTATCAATGAGGAGGGAGT 12257 Query 36450 ACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGG 36509 || | || ||||| ||||| || || ||||| || |||||||| || | ||| || | Sbjct 12258 ACGTCTCTGAATGGATGTTCTCCATCATGATTTGGAAGCCGTAGAAGCAACGAGCTTCAG 12317 Query 36510 TAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGG 36569 ||| || || | | |||||||| | | || || || || || || || | Sbjct 12318 CTGCCTGCACCTCGTTCGAGAATCGTTCGACGAGGTTCTCGTTGACGATCCCATCGGAGC 12377 Query 36570 CTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTT-TGGTGTTA---GTTTA 36625 | || || || || | ||| || || |||| |||||| | || | | | | Sbjct 12378 CAGCGAAGAAGGCGAGTACGTGCGAGATGAAATGACGTTCGTTATCGT-TCAGACGGGTG 12436 Query 36626 TTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCT 36685 | ||| || | ||| | || | || | ||||| ||||||| ||||| |||||| Sbjct 12437 TGCCAGTCTACCAGATCGTGCGAGAGGTCGATCTCTTCGGCTGTCCAGAATGAAGCCTCT 12496 Query 36686 GCCTTTTTATACATATTCCAGAT 36708 |||||||||||||| | ||| || Sbjct 12497 GCCTTTTTATACATTTGCCAAAT 12519 >seq176 Length=24199 Score = 145 bits (160), Expect = 1e-29 Identities = 358/538 (67%), Gaps = 10/538 (2%) Strand=Plus/Minus Query 36179 CCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTT 36238 |||||||| | || || | ||| ||||| ||||| | || ||||| || || | ||| Sbjct 19865 CCCTCGTCGCGGCTGATCAGTTCATTGGAGAACGTCAAGCCAGGCATGAGACCTCTCTTC 19806 Query 36239 TTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAG 36298 || ||||| || ||||||||||| || || || ||||| |||||||| || || |||||| Sbjct 19805 TTGAGCCAGAAGATGGACGCAAACGAGCCCGAGAAGAAGATTCCTTCAACCGCAGCAAAG 19746 Query 36299 GCAATAAGTCTCTCTCCATAACCGGCACTGTCATGT-----ATCCACTTTTGAGCCCAAT 36353 |||| |||| || | ||| | ||| || ||| ||||| | |||||| | Sbjct 19745 GCAACGAGTCGTTCGGC-GAACGCGGACT-TCTTGTCTGAGATCCAGCGTAAAGCCCAGT 19688 Query 36354 CGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAGtttttttCAT 36413 | |||||||| || | ||||| || || || || || | ||||||| | || Sbjct 19687 CAGCCTTCTTCTTGATGCAAGGAATCGTTTCGATGGCGTCGAAGAGATGCTCCCGTTGGG 19628 Query 36414 TACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAA 36473 | ||||| | || ||||| || | || |||| | || || |||||||| || | Sbjct 19627 TCTGGTCTTTGATGTACGTATCGATGAGGAGGGAATACGTCTCGGAGTGAATGTTCTCCA 19568 Query 36474 TGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATC 36533 | ||||| || || ||||| || | ||||| | || ||||| | | || | Sbjct 19567 TCATGATTTGGAAGCCATAGAAGCAGCGGGCCTCAGCTGCTTGGACTTCGTTGGAGAACC 19508 Query 36534 GTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTT 36593 |||| | | ||| || || || || ||||| || || || || || | ||||| Sbjct 19507 GTTCAACGAGATTCTCGTTGACAATACCGTCCGAAGCCGCGAAGAAAGCAAGAACATGAG 19448 Query 36594 TTATAAAATATTTTTCGTT-TGGTGTTA--GTTTATTCCAATCATTGATATCTTTAGATA 36650 || |||| ||||| | || | | | | ||| || | |||||||| || | Sbjct 19447 AGATGAAATGGCGCTCGTTGTCGTTCAACCGGTGTTGCCAGTCGTGCATATCTTTCGACA 19388 Query 36651 TATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGAT 36708 |||| |||||| ||||||| ||||| || || || || || ||||| | |||||| Sbjct 19387 GGTCCATCTCTTCCGCTGTCCAGAATGACGCTTCGGCTTTCTTGTACATTTGCCAGAT 19330 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658087657121160