Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinus_20polychrous_20[genbank_20GCA_5F000787475.1_202014-11-26] 10,349 sequences; 38,054,542 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq2980 89.7 4e-13 >seq2980 Length=15283 Score = 89.7 bits (98), Expect = 4e-13 Identities = 127/178 (71%), Gaps = 3/178 (2%) Strand=Plus/Minus Query 22727 AGTCTA---TCGCAACACGTCTCTTGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTG 22783 |||||| ||||| ||||||| | |||||||| || || |||||| | | ||||||| Sbjct 12131 AGTCTACGTTCGCAGAACGTCTCGTCGCCTTTGCAGCGGTAGAAGGCATATTCTTTTCTG 12072 Query 22784 GGTCATTTGCGGCCATATTCTGGCTGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTT 22843 | | || ||||| || || ||| |||| || | ||||||||||| || ||| | Sbjct 12071 GCTGTTTCGCGGCGATTTTTTGGTTGAAAAAGAGGGGCCTCATGCCAGGACTGACGTACT 12012 Query 22844 CCAACGAGTTGATTAGCCGTGACGAAGGTCTACACTGTGACTTTGCTTGTATGCTGTT 22901 | || ||| |||| || | ||||| || | || ||| ||||||||| |||| || Sbjct 12011 CGAATGAGCTGATCAGTAGAGACGAGGGGTTGCATACTGATTTTGCTTGTTTGCTTTT 11954 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356188668812647