Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinus_20polychrous_20[genbank_20GCA_5F000787475.1_202014-11-26] 10,349 sequences; 38,054,542 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq176 174 2e-38 seq2980 150 3e-31 >seq176 Length=24199 Score = 174 bits (192), Expect = 2e-38 Identities = 367/544 (67%), Gaps = 10/544 (2%) Strand=Plus/Minus Query 49975 TGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCA 50034 |||| |||||||| | || || ||||| ||||| ||||| | || ||||| || || Sbjct 19871 TGCATGCCCTCGTCGCGGCTGATCAGTTCATTGGAGAACGTCAAGCCAGGCATGAGACCT 19812 Query 50035 CGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGCG 50094 | ||| || ||||| || ||||||||||| || || || |||||||||||||| || || Sbjct 19811 CTCTTCTTGAGCCAGAAGATGGACGCAAACGAGCCCGAGAAGAAGATTCCTTCAACCGCA 19752 Query 50095 GCAAAGGCAACAAGTCTCTCTCCATAACTGGCGCTGTCATGT-----ATCCACTTTTGAG 50149 ||||||||||| |||| || | ||| | || || ||| ||||| | || Sbjct 19751 GCAAAGGCAACGAGTCGTTCGGC-GAACGCGGACT-TCTTGTCTGAGATCCAGCGTAAAG 19694 Query 50150 CCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGtttt 50209 |||| || |||||||| || | ||||| |||||||| ||||| | ||||||| | Sbjct 19693 CCCAGTCAGCCTTCTTCTTGATGCAAGGAATCGTTTCGATGGCGTCGAAGAGATGCTCCC 19634 Query 50210 tttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGT 50269 || | ||||| | || |||||||| | || |||| | || || ||||||| Sbjct 19633 GTTGGGTCTGGTCTTTGATGTACGTATCGATGAGGAGGGAATACGTCTCGGAGTGAATGT 19574 Query 50270 TTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGTAC 50329 | || || || || || || ||||| || | ||||| | || ||||| | Sbjct 19573 TCTCCATCATGATTTGGAAGCCATAGAAGCAGCGGGCCTCAGCTGCTTGGACTTCGTTGG 19514 Query 50330 AAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATA 50389 | || |||||| | | ||| || || || || ||||| || || || || || | | Sbjct 19513 AGAACCGTTCAACGAGATTCTCGTTGACAATACCGTCCGAAGCCGCGAAGAAAGCAAGAA 19454 Query 50390 CATGTTTTATAAAATGTTTTTCGTTGGGTGTTA---GTTTATTCCAATCATTGATATCTT 50446 |||| || ||||| |||||| | | | | | ||| || | ||||||| Sbjct 19453 CATGAGAGATGAAATGGCGCTCGTTGTCGTTCAACCGGTGTTGCCAGTCGTGCATATCTT 19394 Query 50447 TAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCC 50506 | || | || | |||||| ||||||| ||||| || || || || || ||||| | || Sbjct 19393 TCGACAGGTCCATCTCTTCCGCTGTCCAGAATGACGCTTCGGCTTTCTTGTACATTTGCC 19334 Query 50507 AGAT 50510 |||| Sbjct 19333 AGAT 19330 >seq2980 Length=15283 Score = 150 bits (166), Expect = 3e-31 Identities = 372/563 (66%), Gaps = 10/563 (2%) Strand=Plus/Plus Query 49956 CAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGT 50015 |||||| || ||||| |||| |||||||||||||| || || || || || |||| Sbjct 11959 CAAACAAGCAAAATCAGTATGCAACCCCTCGTCTCTACTGATCAGCTCATTCGAGTACGT 12018 Query 50016 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAA 50075 ||||| ||||| ||||| | |||||| | |||||| || | ||| || | |||||||| Sbjct 12019 CAGTCCTGGCATGAGGCCCCTCTTTTTCAACCAAAAAATCGCCGCGAAACAGCCAGAAAA 12078 Query 50076 GAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATA-----ACTGGCGCTG 50130 ||| || |||||||| || |||||||| || || | ||| | | |||| | | Sbjct 12079 GAATATGCCTTCTACCGCTGCAAAGGCGACGAGACGTTCTGCGAACGTAGACTGTTGATC 12138 Query 50131 TCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATG 50190 | | ||||||| ||||||| ||||||||||| | | ||| || || || || || Sbjct 12139 TGA--TATCCACCGAAGAGCCCACTCGGCCTTCTTCTGGATACAGGGAATAGTCTCGATA 12196 Query 50191 GCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTA 50250 || | || | || | | | || |||| | || ||||| || | || Sbjct 12197 GCGTCGAATAAGTATTCTCGCTGCTTGACGTCTTGGATGTAGGTATCAATGAGGAGGGAG 12256 Query 50251 TACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCG 50310 ||| | || ||||| ||||| || || || || || |||||||| || | ||| || Sbjct 12257 TACGTCTCTGAATGGATGTTCTCCATCATGATTTGGAAGCCGTAGAAGCAACGAGCTTCA 12316 Query 50311 GTAATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTG 50370 | |||||| || | | |||||||| | | || || || || || || || | Sbjct 12317 GCTGCCTGCACCTCGTTCGAGAATCGTTCGACGAGGTTCTCGTTGACGATCCCATCGGAG 12376 Query 50371 GCTGCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTA---GTTTA 50427 | || || || || | ||| || || ||||| |||||| | | | | Sbjct 12377 CCAGCGAAGAAGGCGAGTACGTGCGAGATGAAATGACGTTCGTTATCGTTCAGACGGGTG 12436 Query 50428 TTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCT 50487 | ||| || | ||| | || | || | ||||| ||||||| ||||| |||||| Sbjct 12437 TGCCAGTCTACCAGATCGTGCGAGAGGTCGATCTCTTCGGCTGTCCAGAATGAAGCCTCT 12496 Query 50488 GCCTTTTTATACATATTCCAGAT 50510 |||||||||||||| | ||| || Sbjct 12497 GCCTTTTTATACATTTGCCAAAT 12519 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718175882952360