Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinus_20polychrous_20[genbank_20GCA_5F000787475.1_202014-11-26] 10,349 sequences; 38,054,542 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq2980 129 6e-25 >seq2980 Length=15283 Score = 129 bits (142), Expect = 6e-25 Identities = 255/375 (68%), Gaps = 2/375 (1%) Strand=Plus/Plus Query 13851 TTTAGATGTTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATA 13910 || ||||| | |||| ||||| ||||||||| ||| | ||||| |||||||| || Sbjct 11942 TTCAGATGATGGAAAAGCAAACAAGCAAAATCAGTATGCAACCCCTCGTCTCTACTGATC 12001 Query 13911 AGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCA 13970 || || || || | || | ||||||||| | || | ||||| |||||||| || || Sbjct 12002 AGCTCATTCGAGTACGTCAGTCCTGGCATGAGGCCCCTCTTTTTCAACCAAAAAATCGCC 12061 Query 13971 GCAAATGACCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCA 14030 || || | || ||||||||||| || || || || ||||| || | | |||||| | Sbjct 12062 GCGAAACAGCCAGAAAAGAATATGCCTTCTACCGCTGCAAAGGCGACGAGACGTTCTGCG 12121 Query 14031 AACGATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAA 14090 |||| | | || | |||||||| |||||| || | || || | ||| | Sbjct 12122 AACGTAGACTGTTGATCTGATATCCACCGAAGAGCCCACTCGGCCTTCTTCTGGATACAG 12181 Query 14091 TCCATTGTTTCAATAGCATTAAATAAATATTCCTTCT-CTTTAGTACTTGAAATGTATGT 14149 || || || ||||| | ||||| ||||| || ||| | |||| ||||| || Sbjct 12182 GGAATAGTCTCGATAGCGTCGAATAAGTATTCTCGCTGCTTGACGTCTTG-GATGTAGGT 12240 Query 14150 ATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATA 14209 |||||| || | | ||| | || || || ||||| ||||| || || || || || Sbjct 12241 ATCAATGAGGAGGGAGTACGTCTCTGAATGGATGTTCTCCATCATGATTTGGAAGCCGTA 12300 Query 14210 AAAGCATCTAGCTTC 14224 ||||| | |||||| Sbjct 12301 GAAGCAACGAGCTTC 12315 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479665941186600