Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinus_20polychrous_20[genbank_20GCA_5F000787475.1_202014-11-26] 10,349 sequences; 38,054,542 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq1988 84.2 2e-11 seq105 82.4 8e-11 >seq1988 Length=7662 Score = 84.2 bits (92), Expect = 2e-11 Identities = 139/201 (69%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 142988 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 143047 ||||| || || || || |||||||| || |||| || || ||||| ||||| Sbjct 4566 GTAGACTCCTTCTGGATATTGTAATCCGACAGGGTGCGGCCATCCTCAAGTTGCTTACCG 4507 Query 143048 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 143107 ||| |||| |||||||| || || ||||| ||||| || ||||| ||| ||| || Sbjct 4506 GCAAAGATGAGACGTTGTTGGTCAGGAGGAATGCCCTCCTTGTCTTGAATCTTTGCCTTA 4447 Query 143108 AGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 143167 | | || | || || | | || || || | || | |||||||||||||| || Sbjct 4446 ACATTGTCGATGGTATCAGAAGACTCGACCTCCAGGGTGATGGTCTTGCCGGTCAAAGTC 4387 Query 143168 TTTACGAATATTTGCATAGCT 143188 || ||||| || |||||| || Sbjct 4386 TTCACGAAGATCTGCATACCT 4366 >seq105 Length=629 Score = 82.4 bits (90), Expect = 8e-11 Identities = 79/99 (80%), Gaps = 2/99 (2%) Strand=Plus/Minus Query 142994 TCTTTTTGTATGTTGTAATCGCTCATTGTGC-TCGAGTCTTCGAGTTGTTTACCAGCATA 143052 || ||||| |||||||| ||| | ||| | || | ||||||||||| || ||||| | Sbjct 570 TCCTTTTGAATGTTGTAGTCGGAGAGTGTACGTCCA-TCTTCGAGTTGCTTGCCAGCGAA 512 Query 143053 GATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTC 143091 ||||||||||||||| ||||| || || ||||| ||||| Sbjct 511 GATCAGACGTTGCTGGTCGGGTGGGATTCCTTCCTTGTC 473 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 506948811349680