Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinus_20polychrous_20[genbank_20GCA_5F000787475.1_202014-11-26] 10,349 sequences; 38,054,542 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq2980 232 1e-55 seq176 183 4e-41 seq7414 86.0 9e-12 >seq2980 Length=15283 Score = 232 bits (256), Expect = 1e-55 Identities = 394/561 (70%), Gaps = 14/561 (2%) Strand=Plus/Minus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 |||||| ||||||| |||||||| |||| || || ||||| | ||||||| |||| || Sbjct 12519 ATTTGGCAAATGTATAAAAAGGCAGAGGCTTCATTCTGGACAGCCGAAGAGATCGACCTC 12460 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 || | || ||| || ||| | || ||| ||| || | || || | || || ||| Sbjct 12459 TCGCACGATCTGGTAGACTGGCACACCCGTCTGAACGATAACGAACGTCATTTCATCTCG 12400 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGACACG 125197 ||| | | |||||||| || ||||||||||| ||||||||||| || || || || ||| Sbjct 12399 CACGTACTCGCCTTCTTCGCTGGCTCCGATGGGATCGTCAACGAGAACCTCGTCGA-ACG 12341 Query 125198 ATTCTCTCAAGAGTTGACCATTC--CAGAGGTGTCG-TGCTTTTACGGATTCCAAATCAT 125254 |||||| | ||| || || | | || | ||| ||||| ||||| ||||||||||| Sbjct 12340 ATTCTCGAACGAGGTG--CAGGCAGCTGAAG-CTCGTTGCTTCTACGGCTTCCAAATCAT 12284 Query 125255 GATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGA--T 125312 ||| |||||| | || || || | |||||| || ||||| | ||||| | || | Sbjct 12283 GATGGAGAACATCCATTCAGAGACGTACTCCCTCCTCATTGATACCTACATCCAAGACGT 12224 Query 125313 C-CGCAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAA 125371 | ||| || || || | || |||| ||||| || | || | ||| | || || Sbjct 12223 CAAGCAGCGAGAATAC---TTATTCGACGCTATCGAGACTATTCCCTGTATCCAGAAGAA 12167 Query 125372 GGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGT 125431 ||| | |||| |||||||||| || | ||||| ||| ||| || | || || Sbjct 12166 GGCCGAGTGGGCTCTTCGGTGGATATCAGATCAACAGTCTACGTTCGCAGAACGTCTCGT 12107 Query 125432 GGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCT 125491 || || || || ||||| ||||| |||||||| || |||| ||||| || |||||| | Sbjct 12106 CGCCTTTGCAGCGGTAGAAGGCATATTCTTTTCTGGCTGTTTCGCGGCGATTTTTTGGTT 12047 Query 125492 CAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGA 125551 || ||| | || |||||||| ||||||||| || || ||| | || | ||||||| Sbjct 12046 GAAAAAGAGGGGCCTCATGCCAGGACTGACGTACTCGAATGAGCTGATCAGTAGAGACGA 11987 Query 125552 GGGCCTACACTGTGACTTTGC 125572 ||| | || ||| ||||| Sbjct 11986 GGGGTTGCATACTGATTTTGC 11966 Score = 183 bits (202), Expect = 4e-41 Identities = 383/564 (68%), Gaps = 20/564 (4%) Strand=Plus/Plus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| ||||||| || |||||| | || ||||| ||||| | || ||| | ||| || Sbjct 13977 ATCTGGCAAATGTATAAGAAGGCTGAAGCGTCCTTCTGGACTGCTGAGGAGATGGATTTG 14036 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 || |||||||| |||| ||||| | | | | || | ||| || | || || || Sbjct 14037 TCGAAGGACCTCCACGACTGGGACAACAGACTCAACGACAATGAACGTCACTTCATCTCA 14096 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGACACG 125197 ||| | | ||||||||||| | ||| ||||| || |||||||| || || || || || Sbjct 14097 CACGTCCTCGCCTTCTTTGCTGCCTCGGATGGTATTGTCAACGAGAACCTCGTCGA-GCG 14155 Query 125198 ATTCTCTCAAGAGTTGACCATTCCAG-AGGTG----TCG-TGCTTTTACGGATTCCAAAT 125251 ||||| | ||| ||| || || || ||| ||||| ||||| |||||||| Sbjct 14156 GTTCTCCAACGAG------GTTCAAGCAGCTGAAGCTCGTTGCTTCTACGGCTTCCAAAT 14209 Query 125252 CATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGA 125311 |||||| |||||| | || || || | ||||| || || |||| ||||| || Sbjct 14210 CATGATGGAGAACATCCATTCAGAGACATACTCCCTTCTCATCGACACATACATCAAGGA 14269 Query 125312 TCC---GCAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAA 125368 || |||||| | ||| ||||| | || ||||| || | || | || || Sbjct 14270 CCCTAAGCAACGCGAGCAC---CTCTTCGATGCTATCGAGACCATTCCTTGCATCAAGAA 14326 Query 125369 AAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACT 125428 |||||| | |||| | || |||||| ||| | || ||| | | | |||| | || Sbjct 14327 GAAGGCTGACTGGGCCTTGCGCTGGATCTCGGACAAGAACTCTGCATTCTCCGAGCGTCT 14386 Query 125429 GGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTG 125488 || || ||||||||||| ||||| |||||||| || || ||| || | |||||||| Sbjct 14387 TGTCGCGTTCGCCGCCGTCGAGGGTATCTTCTTCTCCGGCTCTTTCGCATCTATCTTTTG 14446 Query 125489 GCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGA 125548 | | |||||||| || | ||||| || |||| | || ||||| || || || Sbjct 14447 GTTGAAGAAGCGTGGTTTGATGCCTGGCTTGACCTTCTCGAATGAGTTGATCAGCCGTGA 14506 Query 125549 CGAGGGCCTACACTGTGACTTTGC 125572 ||||||| | || |||||||| Sbjct 14507 CGAGGGCATGCATACCGACTTTGC 14530 Score = 93.3 bits (102), Expect = 6e-14 Identities = 114/156 (73%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 125700 ATTGGCATGAACTGCAAGCTAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTG 125759 ||||| ||||||| |||||| |||||| | ||||| ||||| || || || ||||| || Sbjct 14703 ATTGGTATGAACTCCAAGCTCATGTGCCAATACATTGAGTTCGTCGCCGACCGTCTGTTG 14762 Query 125760 TACGAGTTGATTGGCCGCAAGATTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGC 125819 | ||| | || |||| | ||||||| | || ||||| || |||||| | Sbjct 14763 GCTGCTTTGGGTAACCCCAAGGTGTACAACGTAACCAACCCCTTCGACTTCATGGATATG 14822 Query 125820 ATATCACTAGAGGGTAAGACCAACTTTTTCGAGAAG 125855 || || || |||| ||||||||||| ||||||||| Sbjct 14823 ATCTCGCTCCAGGGCAAGACCAACTTCTTCGAGAAG 14858 >seq176 Length=24199 Score = 183 bits (202), Expect = 4e-41 Identities = 350/510 (69%), Gaps = 12/510 (2%) Strand=Plus/Plus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| |||||||||| || || | || || || ||||| | |||||| | || ||| Sbjct 19330 ATCTGGCAAATGTACAAGAAAGCCGAAGCGTCATTCTGGACAGCGGAAGAGATGGACCTG 19389 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 || || || || |||| ||| | || |||| || | ||||| | || || || Sbjct 19390 TCGAAAGATATGCACGACTGGCAACACCGGTTGAACGACAACGAGCGCCATTTCATCTCT 19449 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGACACG 125197 || || | || ||||| || | || || || || |||||||| ||||| ||||| ||| Sbjct 19450 CATGTTCTTGCTTTCTTCGCGGCTTCGGACGGTATTGTCAACGAGAATCTCGTTGA-ACG 19508 Query 125198 ATTCTCTCAAGAGTTGACCATTC--CAGAGGTGTCGTGCTTTTACGGATTCCAAATCATG 125255 ||||| | || | ||| | | |||| ||||| || || |||||||||||| Sbjct 19509 GTTCTCCAACGAAGT--CCAAGCAGCTGAGGCCCGCTGCTTCTATGGCTTCCAAATCATG 19566 Query 125256 ATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCCG 125315 || |||||| | ||||| || | ||| || || || || | |||||| || | | Sbjct 19567 ATGGAGAACATTCACTCCGAGACGTATTCCCTCCTCATCGATACGTACATCAAAGACCAG 19626 Query 125316 ---CAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAG 125372 ||||| | || ||||| |||| ||||| ||| | || | || || ||| Sbjct 19627 ACCCAACGGGAGCAT---CTCTTCGACGCCATCGAAACGATTCCTTGCATCAAGAAGAAG 19683 Query 125373 GCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTG 125432 ||| | |||| | || |||||| ||| | ||||| ||| |||||| |||| || Sbjct 19684 GCTGACTGGGCTTTACGCTGGATCTCAGACAAGAAGTCCGCGTTCGCCGAACGACTCGTT 19743 Query 125433 GCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTC 125492 || || || || || || || |||||||| ||||| |||||| ||||||| |||||| Sbjct 19744 GCCTTTGCTGCGGTTGAAGGAATCTTCTTCTCGGGCTCGTTTGCGTCCATCTTCTGGCTC 19803 Query 125493 AAGAAGCGCGGACTCATGCCCGGACTGACG 125522 |||||| | || |||||||| || ||||| Sbjct 19804 AAGAAGAGAGGTCTCATGCCTGGCTTGACG 19833 >seq7414 Length=1534 Score = 86.0 bits (94), Expect = 9e-12 Identities = 158/228 (69%), Gaps = 4/228 (2%) Strand=Plus/Minus Query 69933 TCATCGAGGAGCTCTTGTGGATGATTTCCGGATCGACCAATGCCAAAGAGCTGAGCCGAA 69992 || |||| || || | ||| | || ||| |||||| || | ||| |||||| || Sbjct 226 TCGTCGAAGAACTGCTTTGGTTCATCCACGGTTCGACCGATTCGAAACTCCTGAGCGAAA 167 Query 69993 AGGGTGTACACATTTGGAGCGGCAACAGTAGTCGAA-GCGTT-TTGGATTCGCTCGGCTT 70050 |||| || | |||||| || || | |||||| | ||| ||||| | || || Sbjct 166 AGGGGGTCAAGATTTGGGATGGGAATGG--GTCGAAAGAGTTCTTGGAAAAGAGAGGGTT 109 Query 70051 CACCGACAGACAAGAGGGCGATCTGGGGCCAGTGTACGGATTCCAGTGGAGGCACTCGGG 70110 | || |||| ||| || |||||||| || ||||| || |||||||||||||| | || Sbjct 108 GAAAGATAGACGAGAAGGTGATCTGGGACCCGTGTATGGTTTCCAGTGGAGGCATTTTGG 49 Query 70111 CACCAAGTATGTAGACTGCGAGACAGACTATTCGGGTCAGGGTGTTGA 70158 | | || ||||| || ||||| | || ||| |||| |||| || || Sbjct 48 CGCGAAATATGTCGATTGCGACAAGGATTATACGGGGGAGGGCGTCGA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740963334729240