Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinus_20polychrous_20[genbank_20GCA_5F000787475.1_202014-11-26] 10,349 sequences; 38,054,542 total letters Query= NC_005262.3 Length=63882 Score E Sequences producing significant alignments: (Bits) Value seq9720 387 6e-103 seq9599 107 8e-19 >seq9720 Length=1176 Score = 387 bits (428), Expect = 6e-103 Identities = 327/401 (82%), Gaps = 6/401 (1%) Strand=Plus/Minus Query 13841 GATGCAATTGACCATGTTCGGC---GACTCGATGGCGCAGCACCGGCCGTCGTCGTCTGG 13897 |||||||||||||||||||| ||| || || | | | | ||||| ||||| Sbjct 1159 GATGCAATTGACCATGTTCGAGTTGGACGCGGTGAAGACGA---GTGCATCGTCTTCTGG 1103 Query 13898 GAAAACGTCCCCGGCGTCCTCTCGACAAAAGACAATGCGTTCGGGTGCTTTCTGGCTGGG 13957 ||||||||||| ||||||||| || |||||||| || |||||||||||||||| || Sbjct 1102 GAAAACGTCCCTGGCGTCCTCAGCACCAAAGACAACGCATTCGGGTGCTTTCTGGGCAGG 1043 Query 13958 CTTGCCGGAGAAGATGAGCCGCTGGTCGCACCAGGGGGCCGGTGGGCGAACGCTGGTTGT 14017 |||||||| ||||||| ||||||| ||||||||||| ||||||||||||||| | Sbjct 1042 CTTGCCGGGGAAGATGGCCCGCTGGAGCCACCAGGGGGCAAATGGGCGAACGCTGGTGCT 983 Query 14018 GTGTATGGACCCCAGCGTGCAGTCGCTTGGCGGACCCTGGACGCCCAATATTTCGGAGTG 14077 ||||||||||||| ||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct 982 GTGTATGGACCCCGGCGCGCAATCGCTTGGCGGACCCTGGACGCCCAATATTTCGGAGTG 923 Query 14078 GCCCAACGCCGCCGCCGTGTGTTCGTTGTCGCAAGTGGTCGAGACTGGTTCGATCCCACA 14137 |||||||| |||||||||||||||||||||||||||| |||| | ||| ||||||| || Sbjct 922 GCCCAACGACGCCGCCGTGTGTTCGTTGTCGCAAGTGCTCGAAAAGGGTCCGATCCCGCA 863 Query 14138 CCGGTACTTTTTGAGTGGGATGGCGTGCGCCGGGATTGTCCGCCGCGCCGAGGAGTGCGG 14197 |||| |||||||||||||| ||||||||||||||| | | ||| |||||| | | || Sbjct 862 ACGGTTCTTTTTGAGTGGGACGGCGTGCGCCGGGATACTGCACCGAGCCGAGAAACGGGG 803 Query 14198 CAAGCCGCTCCATCCGGAACTCCACGCGGCACTGACGGCGG 14238 ||| |||||| || || ||||| |||||| ||||| Sbjct 802 AAAGTCGCTCCCACCATCCCTTCACGCAGCACTGCAGGCGG 762 >seq9599 Length=603 Score = 107 bits (118), Expect = 8e-19 Identities = 377/566 (67%), Gaps = 36/566 (6%) Strand=Plus/Plus Query 56101 GGCCCGCCGCAGAAGGGGCAGGACATCATCCTGAACGTGATCGCGGACGGCCGTTTCTCG 56160 |||| |||||| ||||| | |||||| ||||| |||||| | || ||||| |||| Sbjct 26 GGCCGGCCGCAAAAGGGCGACGACATCCTCCTGTCGGTGATCACCGATGGCCGCCACTCG 85 Query 56161 GCGATCGACATGCGTTTCGTCGACCCGACCG-CGCCGAGCGACCCGAACAGCAAGCTGAA 56219 ||||||||| |||| ||||||||| || | || | | ||| | || |||||| || Sbjct 86 GCGATCGACCTGCGGTTCGTCGACGCGGATGTCGGCAA-CGAGGAGGGCAACAAGCTCAA 144 Query 56220 CCAGATGATCGA-------CGCCGTGATC--GC-CGACTACCATGCGGCATCCGACTAC- 56268 | ||||||| | |||| ||| || ||| ||| | ||| || || |||| Sbjct 145 TCTCCTGATCGAGAATGTCCACCGT-ATCTGGCGCGA-TACGA-GCGACAATCG-CTACA 200 Query 56269 CAGTACACGACGAACGGCAAGGTCGACCCGATCAAGGGCGCGTCGCACATCATCTTCACG 56328 | | | ||| | ||||| | | | ||| | || ||| ||| || |||||| | Sbjct 201 CCGATCCCGAA-ACCGGCAGGCCCTATCCGCTGCCCGGGGCGGTGCAGATGATCTTCTCC 259 Query 56329 GACATCGGGCTCGGCGAGCAGTCGGCGAAGAACCGCGGCTTCGACATGAAGGCGTGGATC 56388 || |||| | | | || | | | ||| || ||||||||| | | | |||||| Sbjct 260 GATCTCGG-CACCGAGAAC-GCCATCGA-GACACGCGGCTTCTCCGCCTATGTCTGGATC 316 Query 56389 GAAAAGCGTCTGGTCGAGGGCGGCGTGCCCCGCGAGCAGATCGCGTTCATGCGCGACAAC 56448 | | ||| ||||| ||| | || ||| |||||||| ||||||| | || Sbjct 317 CGCGAACAACTGATCGAGATGGGCATACCGGCCGATCAGATCGCCTTCATGCAGCATTAC 376 Query 56449 AAGGAGCAC-GCGAAGAAAGAGCGTCTTTTCGCCGACATGCGCGAGGGCAAAAAGCG--- 56504 ||| || || ||| ||| |||| || ||| ||| | | |||| ||||| Sbjct 377 AAGAAGAACAGCGC-GAAGCAGCGCCTGTTCAACGATCTCAACCAGGGGCGCAAGCGGTT 435 Query 56505 CGTGCTG--ATCGGCGGCAAGGACATGGAAACCGGCGTCAACGTGCAGAAGCGCCTCTAC 56562 ||| ||| |||| | || | ||||| ||||||||||||| |||| ||||||| | Sbjct 436 CGTTCTGGGATCGACCGCGAC--CATGGGCACCGGCGTCAACGCGCAGCAGCGCCTGAAA 493 Query 56563 AGCGAGGAGCATCTGGACGCGCCGTGGTTCCCGGCATCCG---TCGAGCAGCGCGAGGGG 56619 | | | ||||| |||| || ||| | | |||||| |||||||||| || ||| Sbjct 494 GCCCTGCATCATCTCGACGTTCCCTGG---CTGCCATCCGATATCGAGCAGCGGGAAGGG 550 Query 56620 CGCATCATCCGCCAGGGCAACCAGAA 56645 |||||| ||||||||||||||||| Sbjct 551 CGCATCGAGCGCCAGGGCAACCAGAA 576 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 204271832262927