Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinus_20polychrous_20[genbank_20GCA_5F000787475.1_202014-11-26] 10,349 sequences; 38,054,542 total letters Query= NC_005340.1 Length=30636 Score E Sequences producing significant alignments: (Bits) Value seq9209 143 5e-30 >seq9209 Length=729 Score = 143 bits (158), Expect = 5e-30 Identities = 400/604 (66%), Gaps = 36/604 (6%) Strand=Plus/Minus Query 2835 GCTCGCCAGACCAGAAGGGATAAGCGCCGTGCGCCAGCGTGGAAGGTGTCGAAAAGTAAG 2894 ||||||| | |||| ||||||| || ||||||| |||| || ||||| ||||| | Sbjct 659 GCTCGCCGGTCCAGTAGGGATAGGCAGGATGCGCCACGCTGGACGGCGTCGAGAAGTAGG 600 Query 2895 TTGAGCGCAGATGCTTTTGCGAGGCCATGCCCGAGGCGACTTTGCGCAGCTTCTGAAAAT 2954 || |||| | ||| || | ||||||||||||||||| ||| ||| | || || Sbjct 599 TTTTGCGCCACTTCTTGTGGGTCGCCATGCCCGAGGCGACCTTGTTCAGTTCCTCGAACG 540 Query 2955 TCGGGATCCAGAATATTTCATCGACATACAGGTCGCCGTTATGGCTCTGCGCGGTGTTGG 3014 ||| |||||| | ||| |||| ||| | | ||||| ||| |||||| ||| | Sbjct 539 AGTGGACCCAGAAGAATTCGTCGAAATAGAAATTGCCGTGGCGGCCCTGCGCCGTGCGGA 480 Query 3015 AATTGGTGCCGAGAAAAATCAGCTTTG-CGCCG-TTGTT------GCC------------ 3054 | ||||||||||| || ||| | | ||||| | || ||| Sbjct 479 AGTTGGTGCCGAGGAAGTGCAGTTCGGCCGCCGCCTCTTCCTCCGGCCGCAGGTCCGAGG 420 Query 3055 -GATGACAATCGGGTCGCCAGTCAG-GTCGACGTCAACCAG--TCGCGCAAACTGGATGA 3110 ||| | ||||| ||||| ||| ||| ||| | ||||| | ||| || || || || Sbjct 419 TGATCAGCATCGGATCGCCGCCCAGCGTC-ACGCCCACCAGCTTGGCG-AAGCT-GACGA 363 Query 3111 TGTATTCCCGGAACACGTAAGCCTGCGTTTTACTGGCCGACAGAAAAATCTGGTTATGGC 3170 |||| |||||| || ||||| | ||| |||||||| || ||||||||| ||| Sbjct 362 TGTAGCTGCGGAACTGGTGCGCCTGGGCTTTCGATGCCGACAGGAAGATCTGGTTACGGC 303 Query 3171 CGGTCTTGAGCGCGCGCAGCAGTGCCTCGCGGGAAAAGTAGAACGTCGCGCCAATCTGGC 3230 |||||| || |||| | ||| || ||| || |||||| | |||||||| ||||||| Sbjct 302 CGGTCTCGATCGCGTCGATCAGGGCTTCGAAGGCGAAGTAGTAGGTCGCGCCGATCTGGC 243 Query 3231 GGGATTTGAGAATATCGCGAATACGGTGCGCCAGTCCTGCCCGGT--ACCACTGCAACTG 3288 | || || || || ||| ||||||| | | || || | |||| || ||| Sbjct 242 GTGACTTCAGGATCATGCG-----GGTGCGCTGGCTCAGCGCGTTCCACCAGGTCAGCTG 188 Query 3289 GTATTCG-AAAGACTGGTCGAAGAAAATTTCTTCCAGCTTTGCGACAGCCTCATCGCTGA 3347 ||| ||| | || | || | ||| || | || | || | ||| || ||| Sbjct 187 GTAGTCGTAGAGGC-CCTCAAGGAAGATGCGCTTGAGTTCGGCCGCCTGCTCGGCGGTGA 129 Query 3348 AAAAGTTCTTTTTCGGCCTCTTACGCTCCCCCTTGTTACGGTTGGCAACGTTGGGGTTAA 3407 | ||| || |||||| |||| ||| |||| ||| |||||||| || || ||||| Sbjct 128 AGTGGTTTTTCTTCGGCTTCTTGCGCACCCCGGCGTTCCGGTTGGCGACCTTCTCGTTAA 69 Query 3408 GGTC 3411 |||| Sbjct 68 GGTC 65 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 97901566969324