Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinus_20polychrous_20[genbank_20GCA_5F000787475.1_202014-11-26] 10,349 sequences; 38,054,542 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq1988 109 5e-19 seq105 82.4 7e-11 >seq1988 Length=7662 Score = 109 bits (120), Expect = 5e-19 Identities = 141/193 (73%), Gaps = 4/193 (2%) Strand=Plus/Minus Query 94817 TCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAA 94874 ||||| || | ||| |||||| | || || || |||||| ||||| || || | | Sbjct 4278 TCCTTCTGGATGTTGTAATCGG--AGAGGGTGCGACCATCCTCAAGCTGCTTGCCAGCGA 4221 Query 94875 AGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGG 94934 |||| | | ||||| ||||| |||||||| || ||||| | || |||||||||||| Sbjct 4220 AGATGAGACGCTGCTGGTCTGGCGGAATACCCTCCTTGTCCTGGATCTTTGCCTTGACGT 4161 Query 94935 CGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCA 94994 | ||| ||||||| ||||| |||| |||||||| ||||| || | ||| || | Sbjct 4160 TGTCGATCGTGTCAGACGACTCGACCTCAAGAGTGATGGTCTTTCCGGTCAAAGTCTTGA 4101 Query 94995 CAAAGATCTGCAT 95007 | ||||||||||| Sbjct 4100 CGAAGATCTGCAT 4088 Score = 100 bits (110), Expect = 3e-16 Identities = 149/210 (71%), Gaps = 1/210 (0%) Strand=Plus/Minus Query 94799 ACCAAG-TGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857 |||||| || | ||||| ||||| || | || ||||| || ||| | |||||| Sbjct 4579 ACCAAGGTGGAGGGTAGACTCCTTCTGGATATTGTAATCCGACAGGGTGCGGCCATCCTC 4520 Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917 || || || ||| ||||||| | | ||| || || |||||||| || || ||||| | Sbjct 4519 AAGTTGCTTACCGGCAAAGATGAGACGTTGTTGGTCAGGAGGAATGCCCTCCTTGTCTTG 4460 Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977 ||| |||||||| || | ||| || |||| ||||| || | |||||||| || Sbjct 4459 AATCTTTGCCTTAACATTGTCGATGGTATCAGAAGACTCGACCTCCAGGGTGATGGTCTT 4400 Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || | ||| ||||| ||||||||||| Sbjct 4399 GCCGGTCAAAGTCTTCACGAAGATCTGCAT 4370 Score = 96.9 bits (106), Expect = 3e-15 Identities = 115/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911 |||||| ||||| ||||| ||||||| || | |||||| || |||||||| || || || Sbjct 4015 ATCCTCGAGCTGCTTTCCAGCAAAGATCAAACGTTGCTGGTCAGGAGGAATGCCCTCCTT 3956 Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971 ||| | || || |||||||| | ||| ||||||| | ||||| || | ||||| Sbjct 3955 GTCCTGGATCTTAGCCTTGACATTGTCGATCGTGTCAGAGGACTCGACTTCGAGGGTGAT 3896 Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || || | || || || ||||||||||| Sbjct 3895 CGTCTTGCCCGTCAACGTCTTGACGAAGATCTGCAT 3860 Score = 95.1 bits (104), Expect = 1e-14 Identities = 115/157 (73%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911 ||| || ||||| || ||| | ||||| | | ||||| || || |||||||| || || Sbjct 3730 ATCTTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGTGGAATACCCTCCTT 3671 Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971 ||| | || |||||||||||| | | | || || | | ||||| || | |||||| Sbjct 3670 GTCTTGGATCTTTGCCTTGACGTTGTCAATGGTATCGGAGGACTCGACCTCGAGCGTGAT 3611 Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATG 95008 ||| || ||||| || || || || |||||||||||| Sbjct 3610 GGTCTTGCCAGTCAGGGTCTTTACGAAGATCTGCATG 3574 >seq105 Length=629 Score = 82.4 bits (90), Expect = 7e-11 Identities = 135/193 (70%), Gaps = 4/193 (2%) Strand=Plus/Minus Query 94817 TCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAA 94874 |||||||| | ||| || ||| | ||||| | ||| || || || || || | | Sbjct 570 TCCTTTTGAATGTTGTAGTCGG--AGAGTGTACGTCCATCTTCGAGTTGCTTGCCAGCGA 513 Query 94875 AGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGG 94934 |||| | | |||||| || || || || ||||| ||||| | ||||| ||||| ||| Sbjct 512 AGATCAGACGTTGCTGGTCGGGTGGGATTCCTTCCTTGTCTTGGATTTTCGCCTTCACGT 453 Query 94935 CGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCA 94994 | | | ||||| | ||||| || | ||| |||||||| || || || || || | Sbjct 452 TGTCAATCGTGTCGGAAGACTCGACCTCCAACGTAATGGTTTTCCCTGTGAGCGTCTTGA 393 Query 94995 CAAAGATCTGCAT 95007 ||||||||||||| Sbjct 392 CAAAGATCTGCAT 380 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448233207929640