Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinus_20polychrous_20[genbank_20GCA_5F000787475.1_202014-11-26] 10,349 sequences; 38,054,542 total letters Query= NC_006938.1 Length=63649 Score E Sequences producing significant alignments: (Bits) Value seq8888 122 4e-23 >seq8888 Length=1080 Score = 122 bits (134), Expect = 4e-23 Identities = 273/405 (67%), Gaps = 30/405 (7%) Strand=Plus/Plus Query 7987 ATCCTCGTGCTCGGCGACCCGGCCCAGCTCCCGCCCGTCATGGGAGGTGGCTTCTTCACG 8046 ||||| || ||||||||||| |||||| || ||| ||| ||| | |||| ||| || Sbjct 113 ATCCTGGTCCTCGGCGACCCATACCAGCTGCCACCCATCAAGGGCGAAGGCTACTTTAC- 171 Query 8047 GAGGCCA--AGCCGGACATGATGCTGACGGACATCCACCGCCAGGCCAAGGACAACCCCA 8104 | ||| |||| ||| ||||||||||||| || ||||||||||| ||||||| || | Sbjct 172 -CGCCCAGCAGCCCGACGTGATGCTGACGGAGATTCACCGCCAGGCGCAGGACAATCCGA 230 Query 8105 TCATCGAGATGGCGACCCGCGTCCGCGAGGACAGAGGTCTGCCCCTGGGCTCCTATGGAG 8164 |||| ||| | ||| ||||||| | |||| || | | ||| |||| || | Sbjct 231 TCATTCGCATGAGCATGGACGTGCGCGAGGGCCGAGGCCTCCAGCCCGGCACCTACGGCG 290 Query 8165 AC-------TCG-GCCGTGCACCGATTTGGGACG----CCAATGGAGGACATCG-CACGT 8211 || ||| || | || || |||| || | ||| ||||| | || || Sbjct 291 ACAGCCGCGTCGTGCAGCGCGCCACGCTGGGCCGGGACACCATGCGCGACATGGTCATGT 350 Query 8212 CGAGCCGACCAGCTTATATGCGGCCGCAACAAGACGCGTCGAGCGGCGAATAAGAGGATC 8271 | ||||||||| | | ||||||| ||| |||||| | ||| || | | | ||| Sbjct 351 C-CGCCGACCAGGTGCTGTGCGGCCTGAACCGGACGCGCCAGGCGTTCAACACGCGCATC 409 Query 8272 CGCCAGTTCAAGGGCTTC---------GAGG---GAGACCTCCCGGTGGTCGGCGACCGG 8319 |||||| ||||||| | | |||| | |||||||||| ||||||||| Sbjct 410 CGCCAGATCAAGGGGTACGCCGGCGCAGAGGCGCCACACCTCCCGGTACCGGGCGACCGG 469 Query 8320 CTCGTCTGCCTGTCCAATGACCACGAGGAGGGCCTGCTCAACGGC 8364 ||||||||||| || ||| | | |||| ||||||||||| Sbjct 470 CTCGTCTGCCTCAAGAACAACCGCATGAAGGGGTTGCTCAACGGC 514 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 203526326304290