Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinus_20polychrous_20[genbank_20GCA_5F000787475.1_202014-11-26] 10,349 sequences; 38,054,542 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq176 156 5e-33 seq2980 132 6e-26 >seq176 Length=24199 Score = 156 bits (172), Expect = 5e-33 Identities = 364/545 (67%), Gaps = 12/545 (2%) Strand=Plus/Minus Query 33319 TGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCA 33378 |||| |||||||| | || || ||||| ||||| ||||| | || ||||| || || Sbjct 19871 TGCATGCCCTCGTCGCGGCTGATCAGTTCATTGGAGAACGTCAAGCCAGGCATGAGACCT 19812 Query 33379 CGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGCA 33438 | ||| || ||||| || ||||| || || || || || |||||||||||||| || ||| Sbjct 19811 CTCTTCTTGAGCCAGAAGATGGACGCAAACGAGCCCGAGAAGAAGATTCCTTCAACCGCA 19752 Query 33439 GCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCATGT-----ATCCACTTTTGAG 33493 |||||||||| |||| || | ||| | || || ||| ||||| | || Sbjct 19751 GCAAAGGCAACGAGTCGTTCGGC-GAACGCGGACT-TCTTGTCTGAGATCCAGCGTAAAG 19694 Query 33494 CCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGtttt 33553 |||| || |||||||| || | ||||| |||||||| ||||| | ||||||| | Sbjct 19693 CCCAGTCAGCCTTCTTCTTGATGCAAGGAATCGTTTCGATGGCGTCGAAGAGATGCTCCC 19634 Query 33554 tttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGT 33613 || | ||||| | || |||||||| | || |||| | || || ||||||| Sbjct 19633 GTTGGGTCTGGTCTTTGATGTACGTATCGATGAGGAGGGAATACGTCTCGGAGTGAATGT 19574 Query 33614 TTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTAC 33673 | || || || || || || ||||| || | ||||| | || ||||| | Sbjct 19573 TCTCCATCATGATTTGGAAGCCATAGAAGCAGCGGGCCTCAGCTGCTTGGACTTCGTTGG 19514 Query 33674 AAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATA 33733 | || ||||| | | ||| || || || || ||||| || || || || || | | Sbjct 19513 AGAACCGTTCAACGAGATTCTCGTTGACAATACCGTCCGAAGCCGCGAAGAAAGCAAGAA 19454 Query 33734 CATGTTTTATAAAATATTTTTCGTCTGGTGTT----AGTTTATTCCAATCATTGATATCT 33789 |||| || |||| |||| || ||| | | | ||| || | |||||| Sbjct 19453 CATGAGAGATGAAATGGCGCTCGT-TGTCGTTCAACCGGTGTTGCCAGTCGTGCATATCT 19395 Query 33790 TTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATGTTC 33849 || || | || | |||||| ||||||| ||||| || || || || || ||||| | | Sbjct 19394 TTCGACAGGTCCATCTCTTCCGCTGTCCAGAATGACGCTTCGGCTTTCTTGTACATTTGC 19335 Query 33850 CAGAT 33854 ||||| Sbjct 19334 CAGAT 19330 >seq2980 Length=15283 Score = 132 bits (146), Expect = 6e-26 Identities = 369/563 (66%), Gaps = 10/563 (2%) Strand=Plus/Plus Query 33300 CAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGT 33359 |||||| || ||||| |||| |||||||||||||| || || || || || |||| Sbjct 11959 CAAACAAGCAAAATCAGTATGCAACCCCTCGTCTCTACTGATCAGCTCATTCGAGTACGT 12018 Query 33360 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAA 33419 ||||| ||||| ||||| | |||||| | |||||| || | ||||| | |||||||| Sbjct 12019 CAGTCCTGGCATGAGGCCCCTCTTTTTCAACCAAAAAATCGCCGCGAAACAGCCAGAAAA 12078 Query 33420 GAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTG----T 33475 ||| || |||||||| || |||||||| | || | ||| | ||| ||| | Sbjct 12079 GAATATGCCTTCTACCGCTGCAAAGGCGACGAGACGTTCTGC-GAACGTAGACTGTTGAT 12137 Query 33476 CATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGG 33535 | ||||||| ||||||| ||||||||||| | | ||| || || || || || | Sbjct 12138 CTGATATCCACCGAAGAGCCCACTCGGCCTTCTTCTGGATACAGGGAATAGTCTCGATAG 12197 Query 33536 CATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTAT 33595 | | || | || | | | || |||| | || ||||| || | || | Sbjct 12198 CGTCGAATAAGTATTCTCGCTGCTTGACGTCTTGGATGTAGGTATCAATGAGGAGGGAGT 12257 Query 33596 ACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGG 33655 || | || ||||| ||||| || || || || || |||||||| || | ||| || | Sbjct 12258 ACGTCTCTGAATGGATGTTCTCCATCATGATTTGGAAGCCGTAGAAGCAACGAGCTTCAG 12317 Query 33656 TAATCTGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGG 33715 ||| || || | | |||||||| | | || || || || || || || | Sbjct 12318 CTGCCTGCACCTCGTTCGAGAATCGTTCGACGAGGTTCTCGTTGACGATCCCATCGGAGC 12377 Query 33716 CTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTT----AGTTTA 33771 | || || || || | ||| || || |||| ||||| | ||| | | Sbjct 12378 CAGCGAAGAAGGCGAGTACGTGCGAGATGAAATGACGTTCGT-TATCGTTCAGACGGGTG 12436 Query 33772 TTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCT 33831 | ||| || | ||| | || | || | ||||| ||||||| ||||| |||||| Sbjct 12437 TGCCAGTCTACCAGATCGTGCGAGAGGTCGATCTCTTCGGCTGTCCAGAATGAAGCCTCT 12496 Query 33832 GCCTTTTTATACATGTTCCAGAT 33854 |||||||||||||| | ||| || Sbjct 12497 GCCTTTTTATACATTTGCCAAAT 12519 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622866613992840