Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinus_20polychrous_20[genbank_20GCA_5F000787475.1_202014-11-26] 10,349 sequences; 38,054,542 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq1988 95.1 1e-14 seq176 84.2 2e-11 >seq1988 Length=7662 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | || || || || || || || || | |||||| |||| | || || | Sbjct 4656 ATGCAAATCTTCGTCAAGACGTTGACGGGTAAGACTATCACCCTCGAGGTGGAGTCTTCC 4715 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||||||||| | ||||| |||||| ||||| || || || |||||||| ||| Sbjct 4716 GACACCATCGATAACGTCAAGGCCAAGATTCAGGACAAGGAGGGTATCCCTCCCGACCAA 4775 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || |||| || | || ||||| |||||||| || | | | | || ||||| ||| Sbjct 4776 CAGCGACTGATCTTCGCTGGCAAGCAACTCGAGGACGGTCGTACTCTCTCTGACTACAAC 4835 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 ||||| || || ||| |||| || ||||| Sbjct 4836 ATTCAGAAGGAGAGTACGCTCCACCTTGTCCT 4867 >seq176 Length=24199 Score = 84.2 bits (92), Expect = 2e-11 Identities = 127/181 (70%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 119655 ACACGTTTTTCaaaaaaaTTAGTCTTGCCCTCAAGAGATATGTTATTCATAAACTCGAAA 119714 ||||| || || || || || |||||||| | |||||| || | | ||| || |||||| Sbjct 20217 ACACGCTTCTCGAAGAAGTTTGTCTTGCCTTGAAGAGAGATCATGTCCATGAAGTCGAAA 20158 Query 119715 GGATTTGCAGTGTTGAAATGCTTGTCGTAGCCCAACTCGAACAACAGTCGATCTGCCACA 119774 || || | |||| | ||| || |||||| | |||| || || || || || Sbjct 20157 GGGTTCGTCACGTTGTACACCTTAGGGTTGCCCAAGGCACACAAGAGACGGTCAGCGACG 20098 Query 119775 AACTCGATGTATTCGCACATGGATTGCGAATTCATGCCCAACATAGCGACCGGTAAAGCA 119834 ||||||||||||| ||||| | | ||| |||||||| | | |||||| || | ||| Sbjct 20097 AACTCGATGTATTGACACATCAACTTCGAGTTCATGCCAATGAGAGCGACGGGAAGGGCA 20038 Query 119835 T 119835 | Sbjct 20037 T 20037 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478600479035280