Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinus_20polychrous_20[genbank_20GCA_5F000787475.1_202014-11-26] 10,349 sequences; 38,054,542 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq2980 98.7 3e-15 >seq2980 Length=15283 Score = 98.7 bits (108), Expect = 3e-15 Identities = 176/254 (69%), Gaps = 5/254 (2%) Strand=Plus/Minus Query 22400 ACTTATTCCGCGCGATTCGCACCATTCAATCAATTAAGAATAAGGCAGATTGGGCGCTGA 22459 |||||||| ||| || || |||| | || |||| ||||| || ||||| || Sbjct 12209 ACTTATTCGACGCTATCGAGACTATTCCCTGTATCCAGAAGAAGGCCGAGTGGGCTCTTC 12150 Query 22460 AATGGATGAACA-ATGAACGTTCA---TTCGCGGAACGTCTTATTGCATTTGCTGTGGTT 22515 ||||| | || || ||| || ||||| |||||||| | || ||||| | ||| Sbjct 12149 GGTGGAT-ATCAGATCAACAGTCTACGTTCGCAGAACGTCTCGTCGCCTTTGCAGCGGTA 12091 Query 22516 GAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTTTTGGCTaaaaaaaCGTGCAATT 22575 |||||||| ||||||||||| || || || |||||| | ||||| | | | Sbjct 12090 GAAGGCATATTCTTTTCTGGCTGTTTCGCGGCGATTTTTTGGTTGAAAAAGAGGGGCCTC 12031 Query 22576 ATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCGAGATGAGGGTCTTCATACCGAT 22635 ||||| || || |||| || |||||| | || || |||| ||||| | ||||| ||| Sbjct 12030 ATGCCAGGACTGACGTACTCGAATGAGCTGATCAGTAGAGACGAGGGGTTGCATACTGAT 11971 Query 22636 TTTGCGTGTATGCT 22649 ||||| ||| |||| Sbjct 11970 TTTGCTTGTTTGCT 11957 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303180779792918