Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinus_20polychrous_20[genbank_20GCA_5F000787475.1_202014-11-26] 10,349 sequences; 38,054,542 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq1988 114 1e-20 seq105 113 4e-20 seq3402 107 2e-18 seq176 86.0 6e-12 >seq1988 Length=7662 Score = 114 bits (126), Expect = 1e-20 Identities = 143/196 (73%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 131043 CTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTA 131102 |||||| || || |||||||| | ||||| || || ||||||||||| ||| | Sbjct 3766 CTCCTTCTGGATATTGTAATCCGAGAGAGTGCGGCCATCTTCGAGCTGCTTGCCGGCGAA 3707 Query 131103 GATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTG 131162 ||| | |||||||||||| || || || || || ||||| ||| || ||||| | Sbjct 3706 GATGAGACGCTGCTGGTCGGGTGGAATACCCTCCTTGTCTTGGATCTTTGCCTTGACGTT 3647 Query 131163 CTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTAC 131222 || | ||||||| |||||||| |||| || | ||| || || || || || ||||| Sbjct 3646 GTCAATGGTATCGGAGGACTCGACCTCGAGCGTGATGGTCTTGCCAGTCAGGGTCTTTAC 3587 Query 131223 GAAAATCTGCATGACT 131238 ||| |||||||||||| Sbjct 3586 GAAGATCTGCATGACT 3571 Score = 109 bits (120), Expect = 5e-19 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 131032 TGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGC 131091 |||| ||| |||||| || |||||||||||| | |||||| ||||| |||||| Sbjct 4290 TGTAGGGTACTCTCCTTCTGGATGTTGTAATCGGAGAGGGTGCGACCATCCTCAAGCTGC 4231 Query 131092 TTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTC 131151 ||||| ||| |||| | |||||||||||| || || || || || ||||| ||| || Sbjct 4230 TTGCCAGCGAAGATGAGACGCTGCTGGTCTGGCGGAATACCCTCCTTGTCCTGGATCTTT 4171 Query 131152 TGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTT 131211 ||||| | || | || || | ||||||| || | || | ||| || ||||| Sbjct 4170 GCCTTGACGTTGTCGATCGTGTCAGACGACTCGACCTCAAGAGTGATGGTCTTTCCGGTC 4111 Query 131212 AGAGTTTTTACGAAAATCTGCAT 131234 | ||| || ||||| |||||||| Sbjct 4110 AAAGTCTTGACGAAGATCTGCAT 4088 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || |||| ||| || || | || | ||| |||||| ||||||||||| || Sbjct 4086 CCTCCACGCAGACGAAGAACGAGGTGAAGGGTGCTCTCCTTCTGAATGTTGTAGTCAGAA 4027 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||||| |||||||| || || |||| ||||| |||||||| ||||| Sbjct 4026 AGGGTGCGGCCATCCTCGAGCTGCTTTCCAGCAAAGATCAAACGTTGCTGGTCAGGAGGA 3967 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||||| | || | || || | |||||||| Sbjct 3966 ATGCCCTCCTTGTCCTGGATCTTAGCCTTGACATTGTCGATCGTGTCAGAGGACTCGACT 3907 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| ||| | || || || || | || || ||||| |||||||| Sbjct 3906 TCGAGGGTGATCGTCTTGCCCGTCAACGTCTTGACGAAGATCTGCAT 3860 Score = 87.8 bits (96), Expect = 2e-12 Identities = 135/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 131043 CTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTA 131102 |||||| ||||||||||| || | || || |||||| || |||||||| ||| | Sbjct 4847 CTCCTTCTGAATGTTGTAGTCAGAGAGAGTACGACCGTCCTCGAGTTGCTTGCCAGCGAA 4788 Query 131103 GATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTG 131162 ||| | ||||| ||||| |||||||| || || ||||| || || ||||| | Sbjct 4787 GATCAGTCGCTGTTGGTCGGGAGGGATACCCTCCTTGTCCTGAATCTTGGCCTTGACGTT 4728 Query 131163 CTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTAC 131222 || | || |||| ||||| | |||| ||| | || ||||| || | || || || Sbjct 4727 ATCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTACCCGTCAACGTCTTGAC 4668 Query 131223 GAAAATCTGCATG 131235 ||| || |||||| Sbjct 4667 GAAGATTTGCATG 4655 >seq105 Length=629 Score = 113 bits (124), Expect = 4e-20 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 131043 CTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTA 131102 |||||||||||||||||| ||| | || || || || || |||||||| ||| | Sbjct 571 CTCCTTTTGAATGTTGTAGTCGGAGAGTGTACGTCCATCTTCGAGTTGCTTGCCAGCGAA 512 Query 131103 GATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTG 131162 ||| | ||| |||||||| || ||||||||||| ||||| ||||||| ||| | | Sbjct 511 GATCAGACGTTGCTGGTCGGGTGGGATTCCTTCCTTGTCTTGGATTTTCGCCTTCACGTT 452 Query 131163 CTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTAC 131222 || | || |||| ||||||| || | |||| |||||| || || || || || || Sbjct 451 GTCAATCGTGTCGGAAGACTCGACCTCCAACGTAATGGTTTTCCCTGTGAGCGTCTTGAC 392 Query 131223 GAAAATCTGCAT 131234 || |||||||| Sbjct 391 AAAGATCTGCAT 380 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || || | ||| || || | || | ||| |||||||| || ||||||||||| Sbjct 378 CCTCCTCGAAGACGAAGGACGAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAATCAGAG 319 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || ||||| |||||||| || ||| |||| | ||| || || || || || Sbjct 318 AGAGTCCGGCCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGTTGTTGATCTGGGGGA 259 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| ||| ||| | | || | ||| |||| ||||||| Sbjct 258 ATGCCCTCCTTGTCTTGGATCTTCGCCTTCACATTGTCAATAGTGTCGGACGACTCGACC 199 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | || || || || ||||| || ||||| || ||||| Sbjct 198 TCCAAGGTGATCGTCTTGCCCGTGAGAGTCTTAACGAAGATTTGCAT 152 >seq3402 Length=1793 Score = 107 bits (118), Expect = 2e-18 Identities = 97/122 (80%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || || || | ||||||||||||||| |||||||||||||| Sbjct 1380 CCACCACGGAGACGGAGGACCAAGTGAAGGGTCGACTCCTTTTGGATGTTGTAATCGCTG 1439 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| ||||||||||| ||| |||| | ||||||||||| || ||| Sbjct 1440 AGAGTGCGACCATCCTCGAGCTGCTTGCCCGCGAAGATCAGTCGCTGCTGGTCGGGGGGG 1499 Query 131128 AT 131129 || Sbjct 1500 AT 1501 >seq176 Length=24199 Score = 86.0 bits (94), Expect = 6e-12 Identities = 118/165 (72%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 46147 TTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGTTTT 46206 |||||||| || | || |||||||| || || || |||| || || ||| ||| Sbjct 19726 TTCGCCGAACGACTCGTTGCCTTTGCTGCGGTTGAAGGAATCTTCTTCTCGGGCTCGTTT 19785 Query 46207 GCCGCCATCTTTTACATCAAAACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAACGAG 46266 || ||||||| | |||| | | || ||||||| ||| ||||||| ||| || Sbjct 19786 GCGTCCATCTTCTGGCTCAAGAAGAGAGGTCTCATGCCTGGCTTGACGTTCTCCAATGAA 19845 Query 46267 CTGATATCGCGCGACGAGGGCCTGCATACGGACTTTGCGTGTCTC 46311 ||||| |||||||||||| ||||||| ||||| ||||| ||| Sbjct 19846 CTGATCAGCCGCGACGAGGGCATGCATACTGACTTCGCGTGCCTC 19890 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471951739244160