Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinus_20polychrous_20[genbank_20GCA_5F000787475.1_202014-11-26] 10,349 sequences; 38,054,542 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq1988 120 3e-22 >seq1988 Length=7662 Score = 120 bits (132), Expect = 3e-22 Identities = 152/206 (74%), Gaps = 6/206 (3%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || |||||||||||||| || ||||||| | || || ||||| ||| Sbjct 4370 ATGCAGATCTTCGTGAAGACTTTGACCGGCAAGACCATCACCCTGGAGGTCGAGTCTTCT 4429 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 || || ||||| || || | ||||| | ||| ||||| || || ||||| |||||| Sbjct 4430 GATACCATCGA--CAATGTTAAGGCAAAGATTCA-AGACAAGGAGGGCATTCCTCCTGAC 4486 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 ||||| || | || |||||||| || ||| | || |||| ||||| || |||||| Sbjct 4487 CAACAACGTCTCATCTTTGCCGGTAAGCAACTTGAGGATGGCCGCACCCTGTCGGATTAC 4546 Query 25176 AATATTCAAAAAGAATCCACGCTACA 25201 ||||| || || || || || || || Sbjct 4547 AATATCCAGAAGGAGTCTACCCTCCA 4572 Score = 113 bits (124), Expect = 4e-20 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 |||||| || || || |||||||||||||| || ||||||| | || || |||||||| Sbjct 4087 AATGCAGATCTTCGTCAAGACTTTGACCGGAAAGACCATCACTCTTGAGGTCGAGTCGTC 4146 Query 25058 TGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 |||||| ||||| | ||| ||| ||| ||||| || || ||||| || ||||| Sbjct 4147 TGACACGATCGACAACGTCAAGGCAAAGATCCAGGACAAGGAGGGTATTCCGCCAGACCA 4206 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||||| | || || || ||||| || | || |||| |||||| | ||||||||| Sbjct 4207 GCAGCGTCTCATCTTCGCTGGCAAGCAGCTTGAGGATGGTCGCACCCTCTCCGATTACAA 4266 Query 25178 TATTCAAAAAGA 25189 || || || || Sbjct 4267 CATCCAGAAGGA 4278 Score = 102 bits (112), Expect = 7e-17 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || |||||||| |||| || || ||||||| |||| || ||||| || Sbjct 3575 ATGCAGATCTTCGTAAAGACCCTGACTGGCAAGACCATCACGCTCGAGGTCGAGTCCTCC 3634 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 || || || || | ||| ||| ||| ||||| || || |||||||| ||||| Sbjct 3635 GATACCATTGACAACGTCAAGGCAAAGATCCAAGACAAGGAGGGTATTCCACCCGACCAG 3694 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | || || |||||||| || | ||||||| |||||| | ||||||||| Sbjct 3695 CAGCGTCTCATCTTCGCCGGCAAGCAGCTCGAAGATGGCCGCACTCTCTCGGATTACAAT 3754 Query 25179 ATTCAAAAAGAATCCACGCTACAT 25202 || || || || ||| || ||| Sbjct 3755 ATCCAGAAGGAGAGCACCCTCCAT 3778 Score = 100 bits (110), Expect = 2e-16 Identities = 141/193 (73%), Gaps = 4/193 (2%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || ||||| ||||| ||||| | ||||| |||| |||||||| || Sbjct 4656 ATGCAAATCTTCGTCAAGACGTTGACGGGTAAGACTATCACCCTCGAGGTGGAGTCTTCC 4715 Query 25059 GACACTATCGAGTCAC-TGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 ||||| ||||| | || | ||| | || | ||| ||||| || || || || || |||| Sbjct 4716 GACACCATCGA-TAACGTCAAGGCCAAGATTCAG-GACAAGGAGGGTATCCCTCCCGACC 4773 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 ||||||| | || || || ||||| ||| | || || | ||| ||| | || |||| Sbjct 4774 AACAGCGACTGATCTTCGCTGGCAAGCAACTCGAGGACGGTCGTACTCTCTCTGACTACA 4833 Query 25177 ATATTCAAAAAGA 25189 | ||||| || || Sbjct 4834 ACATTCAGAAGGA 4846 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433273345016435