Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinus_20polychrous_20[genbank_20GCA_5F000787475.1_202014-11-26] 10,349 sequences; 38,054,542 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq176 194 2e-44 seq2980 185 1e-41 >seq176 Length=24199 Score = 194 bits (214), Expect = 2e-44 Identities = 384/562 (68%), Gaps = 11/562 (2%) Strand=Plus/Minus Query 93091 GCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAA 93150 |||||| ||||| ||||| | || ||||| || |||| |||||| ||| || || Sbjct 19887 GCACGCGAAGTCAGTATGCATGCCCTCGTCGCGGCTGATCAGTTCATTGGAGAACGTCAA 19828 Query 93151 ACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaa 93210 || || | || |||| ||||||||||| || || || ||||| || || || || Sbjct 19827 GCCAGGCATGAGACCTCTCTTCTTGAGCCAGAAGATGGACGCAAACGAGCCCGAGAAGAA 19768 Query 93211 TATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTG-C 93269 || ||||| || || ||||| || || | |||||||| || ||||| || || | Sbjct 19767 GATTCCTTCAACCGCAGCAAAGGCAACGAGTCGTTCGGCGAA---CGCGGACTTCTTGTC 19711 Query 93270 T--GATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGC 93327 | |||||| ||||||||| || || || ||||| || ||||| | |||||||| || Sbjct 19710 TGAGATCCAGCGTAAAGCCCAGTCAGCCTTCTTCTTGATGCAAGGAATCGTTTCGATGGC 19651 Query 93328 GTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATA 93387 || || || | || || | | | ||| ||||| |||||||| | || ||||| Sbjct 19650 GTCGAAGAGATGCTCCCGTTGGGTCTGGTCTTTGATGTACGTATCGATGAGGAGGGAATA 19591 Query 93388 CATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCG- 93446 | | || || || | |||||||| |||||||| || ||||| || | || || | Sbjct 19590 CGTCTCGGAGTGAATGTTCTCCATCATGATTTGGAAGCCATAGAAGCAGCGGGCCTCAGC 19531 Query 93447 TGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATG 93506 || | || ||||| | || || | || |||||||| || ||||| ||||| || || | Sbjct 19530 TGCT-TGGACTTCGTTGGAGAACCGTTCAACGAGATTCTCGTTGACAATACCGTCCGAAG 19472 Query 93507 CTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAA---GCTTAT 93563 | || || ||||| | | ||| || ||||| ||| | || || | | | | Sbjct 19471 CCGCGAAGAAAGCAAGAACATGAGAGATGAAATGGCGCTCGTTGTCGTTCAACCGGTGTT 19412 Query 93564 CCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTG 93623 ||| ||| | |||||| || || || | ||||| | ||||| || || ||||| | Sbjct 19411 GCCAGTCGTGCATATCTTTCGACAGGTCCATCTCTTCCGCTGTCCAGAATGACGCTTCGG 19352 Query 93624 CTTTTTTGTACATATCCCATAT 93645 |||| |||||||| | ||| || Sbjct 19351 CTTTCTTGTACATTTGCCAGAT 19330 >seq2980 Length=15283 Score = 185 bits (204), Expect = 1e-41 Identities = 382/564 (68%), Gaps = 11/564 (2%) Strand=Plus/Minus Query 93089 AAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTT 93148 ||||| |||||||||||||| | || ||||| || ||||||||||| ||| || Sbjct 14536 AAGCAAGCAAAGTCGGTATGCATGCCCTCGTCACGGCTGATCAACTCATTCGAGAAGGTC 14477 Query 93149 AAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaa 93208 || || || | || || || ||||| | |||||| || || || ||| || || || Sbjct 14476 AAGCCAGGCATCAAACCACGCTTCTTCAACCAAAAGATAGATGCGAAAGAGCCGGAGAAG 14417 Query 93209 aaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTG 93268 || ||||| || ||||| || || || |||| ||| |||| || ||| || || || Sbjct 14416 AAGATACCCTCGACGGCGGCGAACGCGACAAGACGCTCGGAGAA---TGCAGAGTTCTTG 14360 Query 93269 ---CTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATA 93325 |||||| || ||||| || || || ||||| || ||||| | || |||||| Sbjct 14359 TCCGAGATCCAGCGCAAGGCCCAGTCAGCCTTCTTCTTGATGCAAGGAATGGTCTCGATA 14300 Query 93326 GCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAA 93385 || | || |||| || || | | | || |||||||| ||||| | || || Sbjct 14299 GCATCGAAGAGGTGCTCGCGTTGCTTAGGGTCCTTGATGTATGTGTCGATGAGAAGGGAG 14240 Query 93386 TACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCC 93445 || | || ||||||| |||||||| |||||||| |||||||| || | |||||| Sbjct 14239 TATGTCTCTGAATGGATGTTCTCCATCATGATTTGGAAGCCGTAGAAGCAACGAGCTTCA 14180 Query 93446 G-TGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGA 93504 | || | || || || | || || | ||| ||||| || || ||||| |||||||| || Sbjct 14179 GCTGCT-TGAACCTCGTTGGAGAACCGCTCGACGAGGTTCTCGTTGACAATACCATCCGA 14121 Query 93505 TGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAAG---CTT 93561 || ||||| || || | | || || || || |||| || || || || Sbjct 14120 GGCAGCAAAGAAGGCGAGGACGTGTGAGATGAAGTGACGTTCATTGTCGTTGAGTCTGTT 14061 Query 93562 ATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTC 93621 ||||| ||| || || || || | ||| | || || ||||||| || || ||||| Sbjct 14060 GTCCCAGTCGTGGAGGTCCTTCGACAAATCCATCTCCTCAGCAGTCCAGAAGGACGCTTC 14001 Query 93622 TGCTTTTTTGTACATATCCCATAT 93645 || || || ||||| | ||| || Sbjct 14000 AGCCTTCTTATACATTTGCCAGAT 13977 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556788763094760