Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinus_20polychrous_20[genbank_20GCA_5F000787475.1_202014-11-26] 10,349 sequences; 38,054,542 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq1988 132 4e-26 seq105 118 9e-22 >seq1988 Length=7662 Score = 132 bits (146), Expect = 4e-26 Identities = 148/198 (75%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || ||||| ||||| || || |||| || || || || | | Sbjct 4370 ATGCAGATCTTCGTGAAGACTTTGACCGGCAAGACCATCACCCTGGAGGTCGAGTCTTCT 4429 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | ||| || | || ||| ||||||||||||||||| ||||| || || ||| Sbjct 4430 GATACCATCGACAATGTTAAGGCAAAGATTCAAGACAAGGAGGGCATTCCTCCTGACCAA 4489 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 |||||||| || |||||||| || || | |||||| ||||||| | || |||||||| Sbjct 4490 CAACGTCTCATCTTTGCCGGTAAGCAACTTGAGGATGGCCGCACCCTGTCGGATTACAAT 4549 Query 22399 ATTCAAAAAGAATCCACC 22416 || || || || || ||| Sbjct 4550 ATCCAGAAGGAGTCTACC 4567 Score = 125 bits (138), Expect = 6e-24 Identities = 150/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | || || || || |||| || || || || || || Sbjct 3575 ATGCAGATCTTCGTAAAGACCCTGACTGGCAAGACCATCACGCTCGAGGTCGAGTCCTCC 3634 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | ||| | |||| ||| || |||||||||||||||||||||||||| || Sbjct 3635 GATACCATTGACAACGTCAAGGCAAAGATCCAAGACAAGGAGGGTATTCCACCCGACCAG 3694 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || |||||||| ||| | || ||| |||||| |||| |||||||| Sbjct 3695 CAGCGTCTCATCTTCGCCGGCAAGCAGCTCGAAGATGGCCGCACTCTCTCGGATTACAAT 3754 Query 22399 ATTCAAAAAGAATCCACCATACAT 22422 || || || || |||| | ||| Sbjct 3755 ATCCAGAAGGAGAGCACCCTCCAT 3778 Score = 123 bits (136), Expect = 2e-23 Identities = 142/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || ||||| ||||| || || |||||||||| || || | | Sbjct 4088 ATGCAGATCTTCGTCAAGACTTTGACCGGAAAGACCATCACTCTTGAGGTCGAGTCGTCT 4147 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | |||| ||| || || ||||||||||||||||| || || || Sbjct 4148 GACACGATCGACAACGTCAAGGCAAAGATCCAGGACAAGGAGGGTATTCCGCCAGACCAG 4207 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || || ||||| ||| | |||||| |||||| |||||||||||||| Sbjct 4208 CAGCGTCTCATCTTCGCTGGCAAGCAGCTTGAGGATGGTCGCACCCTCTCCGATTACAAC 4267 Query 22399 ATTCAAAAAGA 22409 || || || || Sbjct 4268 ATCCAGAAGGA 4278 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || || || || || ||| |||| || ||||| || || | Sbjct 3860 ATGCAGATCTTCGTCAAGACGTTGACGGGCAAGACGATCACCCTCGAAGTCGAGTCCTCT 3919 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| || |||| || || || ||||||||||| ||||| || || || Sbjct 3920 GACACGATCGACAATGTCAAGGCTAAGATCCAGGACAAGGAGGGCATTCCTCCTGACCAG 3979 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 |||||| | || ||||| || || ||| | |||||| ||||||| | || || |||||| Sbjct 3980 CAACGTTTGATCTTTGCTGGAAAGCAGCTCGAGGATGGCCGCACCCTTTCTGACTACAAC 4039 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 ||||| || || |||| | || | ||| | || |||| ||||| Sbjct 4040 ATTCAGAAGGAGAGCACCCTTCACCTCGTTCTTCGTCTGCGTGGAGG 4086 Score = 102 bits (112), Expect = 7e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || || || || || || ||||| || |||| || || ||||| | || Sbjct 4656 ATGCAAATCTTCGTCAAGACGTTGACGGGTAAGACTATCACCCTCGAGGTGGAGTCTTCC 4715 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || | |||| || ||||| |||||||||||||| || ||||| ||| Sbjct 4716 GACACCATCGATAACGTCAAGGCCAAGATTCAGGACAAGGAGGGTATCCCTCCCGACCAA 4775 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || || || ||||| || | ||||| || || |||| || |||||| Sbjct 4776 CAGCGACTGATCTTCGCTGGCAAGCAACTCGAGGACGGTCGTACTCTCTCTGACTACAAC 4835 Query 22399 ATTCAAAAAGA 22409 ||||| || || Sbjct 4836 ATTCAGAAGGA 4846 >seq105 Length=629 Score = 118 bits (130), Expect = 9e-22 Identities = 145/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || ||||| ||| | || || || ||| |||| | || || || | || Sbjct 152 ATGCAAATCTTCGTTAAGACTCTCACGGGCAAGACGATCACCTTGGAGGTCGAGTCGTCC 211 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| || | || || || |||||||||||||| ||||| || |||||| Sbjct 212 GACACTATTGACAATGTGAAGGCGAAGATCCAAGACAAGGAGGGCATTCCCCCAGATCAA 271 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 |||||||| || || || || || ||| | |||||| ||| || |||| ||||||||| Sbjct 272 CAACGTCTCATCTTCGCTGGAAAGCAGCTCGAGGATGGCCGGACTCTCTCTGATTACAAC 331 Query 22399 ATTCAAAAAGAATCCACC 22416 || || || || || ||| Sbjct 332 ATCCAGAAGGAGTCTACC 349 Score = 93.3 bits (102), Expect = 4e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || | || || ||||| | || | || || || | || Sbjct 380 ATGCAGATCTTTGTCAAGACGCTCACAGGGAAAACCATTACGTTGGAGGTCGAGTCTTCC 439 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | | || ||||| ||||||||||| || || |||||||| || Sbjct 440 GACACGATTGACAACGTGAAGGCGAAAATCCAAGACAAGGAAGGAATCCCACCCGACCAG 499 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 |||||||| || || || ||||| || | || ||| || || ||||||| |||||| Sbjct 500 CAACGTCTGATCTTCGCTGGCAAGCAACTCGAAGATGGACGTACACTCTCCGACTACAAC 559 Query 22399 ATTCAAAAAGA 22409 |||||||| || Sbjct 560 ATTCAAAAGGA 570 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419675060363185