Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinus_20polychrous_20[genbank_20GCA_5F000787475.1_202014-11-26] 10,349 sequences; 38,054,542 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq1988 122 7e-23 seq105 107 2e-18 >seq1988 Length=7662 Score = 122 bits (134), Expect = 7e-23 Identities = 145/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 ||||| || || || || |||||||| || || || ||| |||||||| ||||| Sbjct 4566 GTAGACTCCTTCTGGATATTGTAATCCGACAGGGTGCGGCCATCCTCAAGTTGCTTACCG 4507 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || |||||||||| |||||||| ||||||||||| || ||||| ||||||| || Sbjct 4506 GCAAAGATGAGACGTTGTTGGTCAGGAGGAATGCCCTCCTTGTCTTGAATCTTTGCCTTA 4447 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | || | ||| || | || ||||| |||| ||| | || |||||||||| ||| Sbjct 4446 ACATTGTCGATGGTATCAGAAGACTCGACCTCCAGGGTGATGGTCTTGCCGGTCAAAGTC 4387 Query 114366 TTTACAAAAATCTGCAT 114382 || || || |||||||| Sbjct 4386 TTCACGAAGATCTGCAT 4370 Score = 104 bits (114), Expect = 2e-17 Identities = 140/195 (72%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 114192 TCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAG 114251 || || || || |||||||| | ||| || |||||| || || || || ||| || Sbjct 3765 TCCTTCTGGATATTGTAATCCGAGAGAGTGCGGCCATCTTCGAGCTGCTTGCCGGCGAAG 3706 Query 114252 ATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGT 114311 ||||||||||| ||||| || ||||| || || ||||| |||||| || | | Sbjct 3705 ATGAGACGCTGCTGGTCGGGTGGAATACCCTCCTTGTCTTGGATCTTTGCCTTGACGTTG 3646 Query 114312 TCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACA 114371 |||| ||| |||| ||| ||||| || | || | || ||||| ||||| || ||||| Sbjct 3645 TCAATGGTATCGGAGGACTCGACCTCGAGCGTGATGGTCTTGCCAGTCAGGGTCTTTACG 3586 Query 114372 AAAATCTGCATGGCT 114386 || ||||||||| || Sbjct 3585 AAGATCTGCATGACT 3571 Score = 96.9 bits (106), Expect = 3e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 114192 TCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAG 114251 || || || |||||||||||| | || ||| ||| ||||| || || |||||| || Sbjct 4278 TCCTTCTGGATGTTGTAATCGGAGAGGGTGCGACCATCCTCAAGCTGCTTGCCAGCGAAG 4219 Query 114252 ATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGT 114311 ||||||||||| ||||| || ||||| || || ||||| |||||| || | | Sbjct 4218 ATGAGACGCTGCTGGTCTGGCGGAATACCCTCCTTGTCCTGGATCTTTGCCTTGACGTTG 4159 Query 114312 TCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACA 114371 || | ||||| | || ||||| || | || | || || ||||||| ||| || || Sbjct 4158 TCGATCGTGTCAGACGACTCGACCTCAAGAGTGATGGTCTTTCCGGTCAAAGTCTTGACG 4099 Query 114372 AAAATCTGCAT 114382 || |||||||| Sbjct 4098 AAGATCTGCAT 4088 Score = 89.7 bits (98), Expect = 4e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 114192 TCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAG 114251 || || ||||||||||| || | ||||||| || || ||||| || |||||| || Sbjct 4846 TCCTTCTGAATGTTGTAGTCAGAGAGAGTACGACCGTCCTCGAGTTGCTTGCCAGCGAAG 4787 Query 114252 ATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGT 114311 || || ||||||||||| ||||| || || || ||||| |||||| || | | Sbjct 4786 ATCAGTCGCTGTTGGTCGGGAGGGATACCCTCCTTGTCCTGAATCTTGGCCTTGACGTTA 4727 Query 114312 TCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACA 114371 || | |||||||| || || || || | ||| | || || || |||| || || || Sbjct 4726 TCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTACCCGTCAACGTCTTGACG 4667 Query 114372 AAAATCTGCATG 114383 || || |||||| Sbjct 4666 AAGATTTGCATG 4655 >seq105 Length=629 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 ||||| || || || ||||||||||| | ||| || ||| || || || || ||| Sbjct 348 GTAGACTCCTTCTGGATGTTGTAATCAGAGAGAGTCCGGCCATCCTCGAGCTGCTTTCCA 289 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| |||||||||| ||||| || || |||||||| || ||||| ||||| || Sbjct 288 GCGAAGATGAGACGTTGTTGATCTGGGGGAATGCCCTCCTTGTCTTGGATCTTCGCCTTC 229 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| ||||||| || ||||| |||| ||| | ||| ||||| || ||||| Sbjct 228 ACATTGTCAATAGTGTCGGACGACTCGACCTCCAAGGTGATCGTCTTGCCCGTGAGAGTC 169 Query 114366 TTTACAAAAATCTGCAT 114382 || || || || ||||| Sbjct 168 TTAACGAAGATTTGCAT 152 Score = 102 bits (112), Expect = 7e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 114192 TCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAG 114251 || |||||||||||||| ||| | ||||| |||||| ||||| || |||||| || Sbjct 570 TCCTTTTGAATGTTGTAGTCGGAGAGTGTACGTCCATCTTCGAGTTGCTTGCCAGCGAAG 511 Query 114252 ATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGT 114311 || ||||| || ||||| || || || ||||| ||||| || || || | | Sbjct 510 ATCAGACGTTGCTGGTCGGGTGGGATTCCTTCCTTGTCTTGGATTTTCGCCTTCACGTTG 451 Query 114312 TCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACA 114371 |||| ||||||| || ||||| |||| || | ||||| || || || || || ||| Sbjct 450 TCAATCGTGTCGGAAGACTCGACCTCCAACGTAATGGTTTTCCCTGTGAGCGTCTTGACA 391 Query 114372 AAAATCTGCAT 114382 || |||||||| Sbjct 390 AAGATCTGCAT 380 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420081409104588