Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinus_20polychrous_20[genbank_20GCA_5F000787475.1_202014-11-26] 10,349 sequences; 38,054,542 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq176 242 7e-59 seq2980 224 2e-53 seq1347 150 3e-31 >seq176 Length=24199 Score = 242 bits (268), Expect = 7e-59 Identities = 377/530 (71%), Gaps = 9/530 (2%) Strand=Plus/Plus Query 42423 CTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATG 42482 || || |||||||| || || ||||| || ||||| ||||| || | ||||| Sbjct 19456 CTTGCTTTCTTCGCGGCTTCGGACGGTATTGTCAACGAGAATCTCGTTGAACGGTTCTCC 19515 Query 42483 AAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAAC 42542 || || || || |||||| ||||||||||| |||||||| || || |||||| Sbjct 19516 AACGAAGTCCAAGCAGCTGAGGCCCGCTGCTTCTATGGCTTCCAAATCATGATGGAGAAC 19575 Query 42543 GTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTCGAGCGT 42602 | ||||| ||| ||| || || || | ||||||||| || | | | || Sbjct 19576 ATTCACTCCGAGACGTATTCCCTCCTCATCGATACGTACATCAAAGACCAGACCCAACGG 19635 Query 42603 AACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCG 42662 | || ||| | ||||| || ||||| || ||||||||||||||||| |||||||| Sbjct 19636 GAGCATCTCTTCGACGCCATCGAAACGATTCCTTGCATCAAGAAGAAGGCTGACTGGGCT 19695 Query 42663 CTCAACTGGATCGAGAGTCCCGACG-CAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGC 42721 | ||||||| || | || | | |||||| ||| | || || |||||| | || Sbjct 19696 TTACGCTGGATCTC-AGACAAGAAGTCCGCGTTCGCCGAACGACTCGTTGCCTTTGCTGC 19754 Query 42722 CGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGA-AGG 42780 || || || ||||||||||||||| | || || |||||||||||||||||| ||| ||| Sbjct 19755 GGTTGAAGGAATCTTCTTCTCGGGCTCGTTTGCGTCCATCTTCTGGCTCAAGAAGAGAGG 19814 Query 42781 TGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATA 42840 | || ||||| || | || ||||| || ||||| |||||| | |||||||| |||||| Sbjct 19815 TCTC-ATGCCTGGCTTGACGTTCTCCAATGAACTGATCAGCCGCGACGAGGGCATGCATA 19873 Query 42841 GGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTC-GAAGGAGCGG 42899 ||||| || |||||||||||||| ||||||| | | | |||| || Sbjct 19874 CTGACTTCGCGTGCCTCCTGTTCTC---TCACCTCA-GAAGGCGTCCTCACCCTGACACT 19929 Query 42900 GTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCAC 42949 ||| | |||||||| |||||||| ||||| ||| ||||||||||||| Sbjct 19930 GTCAAGAGGATCATCACTGAGGCCGTCGAGATTGAGCAGGAGTTCCTCAC 19979 >seq2980 Length=15283 Score = 224 bits (248), Expect = 2e-53 Identities = 448/656 (68%), Gaps = 12/656 (2%) Strand=Plus/Plus Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359 |||||| ||||| |||||||| | ||| |||||| || |||||||| || || Sbjct 13977 ATCTGGCAAATGTATAAGAAGGCTGAAGCGTCCTTCTGGACTGCTGAGGAGATGGATTTG 14036 Query 42360 GCCAAGGACACGGCCGGCTGGGAGTCACTGTCT----GAGAACGAAAAGTTTTTCCTCAA 42415 | |||||| || |||||| || | || || || ||| ||| || Sbjct 14037 TCGAAGGACCTCCACGACTGGGACA-ACAGACTCAACGACAATGAACGTCACTTCATCTC 14095 Query 42416 AAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAG 42475 | || | || |||||||| || ||||| || || || ||||| |||||||| | | | Sbjct 14096 ACACGTCCTCGCCTTCTTTGCTGCCTCGGATGGTATTGTCAACGAGAACCTCGTCGAGCG 14155 Query 42476 GTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCAT 42535 |||| || ||||| || ||| || || ||||||||||||||||| || || Sbjct 14156 GTTCTCCAACGAGGTTCAAGCAGCTGAAGCTCGTTGCTTCTACGGCTTCCAAATCATGAT 14215 Query 42536 AGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGT 42595 |||||| | || || ||| ||| || || || |||| |||||| ||| || Sbjct 14216 GGAGAACATCCATTCAGAGACATACTCCCTTCTCATCGACACATACATCAAGGACCCTAA 14275 Query 42596 CGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGA 42655 | || | || ||| | || || ||||| || || ||||||||||||||||| || Sbjct 14276 GCAACGCGAGCACCTCTTCGATGCTATCGAGACCATTCCTTGCATCAAGAAGAAGGCTGA 14335 Query 42656 CTGGGCGCTCAACTGGATCGAGAGTCCCGA-CGCAACGTTCGGCGAGAGGCTGGTAGCCT 42714 |||||| | ||||||| | | | || | | | ||| |||| | || || || | Sbjct 14336 CTGGGCCTTGCGCTGGATCTCG-GACAAGAACTCTGCATTCTCCGAGCGTCTTGTCGCGT 14394 Query 42715 TTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGC 42774 | ||||||||||||| ||||||||||| ||| | ||||| || ||||| ||| | ||| Sbjct 14395 TCGCCGCCGTCGAGGGTATCTTCTTCTCCGGCTCTTTCGCATCTATCTTTTGGTTGAAGA 14454 Query 42775 AGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGC 42834 || | | |||||| || | ||||||||||| || | |||||| | |||||||| Sbjct 14455 AGCGTGGTTTGATGCCTGGCTTGACCTTCTCGAATGAGTTGATCAGCCGTGACGAGGGCA 14514 Query 42835 TGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTC-GAAG 42893 |||||| |||||||| ||| | || ||| || ||||||||| | | | |||| Sbjct 14515 TGCATACCGACTTTGCTTGCTTGCTCTTC---AGTCACCTCAGG-AGACGGCCTCATCCT 14570 Query 42894 GAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCAC 42949 || ||| || || ||||| |||||||| ||||| ||| | |||||||| || Sbjct 14571 GACACCGTCAGGAGAATTATCACCGAGGCCGTTGAGATTGAGCAAGAGTTCCTGAC 14626 Score = 167 bits (184), Expect = 4e-36 Identities = 376/558 (67%), Gaps = 23/558 (4%) Strand=Plus/Minus Query 42309 ATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTGGCCAAGGAC 42368 ||||| || ||||| || || |||||| ||||| ||||| ||||| | | || Sbjct 12510 ATGTATAAAAAGGCAGAGGCTTCATTCTGGACAGCCGAAGAGATCGACCTCTCGCACGAT 12451 Query 42369 ACGGCCGGCTGGGAGTCACTGTCTGAG----AACGAAAAGTTTTTCCTCAAAAACATACT 42424 || | |||| | | | |||||| |||||| |||| || || |||| Sbjct 12450 CTGGTAGACTGGCACACCC-GTCTGAACGATAACGAACGTCATTTCATCTCGCACGTACT 12392 Query 42425 GGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATGAA 42484 ||||||||||| | ||| || || || ||||| |||||||| | | | ||| ||| Sbjct 12391 CGCCTTCTTCGCTGGCTCCGATGGGATCGTCAACGAGAACCTCGTCGAACGATTCTCGAA 12332 Query 42485 AGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAACGT 42544 ||||||||| ||| || || ||||||||||||||||| || || |||||| | Sbjct 12331 CGAGGTGCAGGCAGCTGAAGCTCGTTGCTTCTACGGCTTCCAAATCATGATGGAGAACAT 12272 Query 42545 GCACTCTGAGGTGTACGCCAAACTGCTCA---ACACGTACATCCTGGATCCCGTCGAGCG 42601 || || ||| |||| || || |||| | || ||||||| || |||| ||| Sbjct 12271 CCATTCAGAGACGTACTCC---CTCCTCATTGATACCTACATCCAAGA---CGTCAAGC- 12219 Query 42602 TAACGGG-----CTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGAC 42656 | || | | ||| | || || ||||| || ||||| ||| |||||||||| || Sbjct 12218 -AGCGAGAATACTTATTCGACGCTATCGAGACTATTCCCTGTATCCAGAAGAAGGCCGAG 12160 Query 42657 TGGGCGCTCAACTGGAT-CGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCTT 42715 ||||| || ||||| ||| || | | ||||||| || | || || ||||| Sbjct 12159 TGGGCTCTTCGGTGGATATCAGA-TCAACAGTCTACGTTCGCAGAACGTCTCGTCGCCTT 12101 Query 42716 TACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCA 42775 | | || || || ||||| ||||| || ||| ||||| | || || ||| | || | Sbjct 12100 TGCAGCGGTAGAAGGCATATTCTTTTCTGGCTGTTTCGCGGCGATTTTTTGGTTGAAAAA 12041 Query 42776 GAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCT 42835 || || ||||| ||||| || | |||||| || || ||||| || ||||||||| | Sbjct 12040 GAGGGGCCTCATGCCAGGACTGACGTACTCGAATGAGCTGATCAGTAGAGACGAGGGGTT 11981 Query 42836 GCATAGGGACTTTGCCTG 42853 ||||| || ||||| || Sbjct 11980 GCATACTGATTTTGCTTG 11963 >seq1347 Length=113524 Score = 150 bits (166), Expect = 3e-31 Identities = 208/291 (71%), Gaps = 0/291 (0%) Strand=Plus/Minus Query 244298 CCCCACATGTCAAACTGCAGCAGCCCCTTGCTGACGGGGCTGCCCTCGTAGGTCGGGTAG 244357 ||||||||||| |||| | | ||| ||||||| || ||||| ||||| ||| ||| Sbjct 32837 CCCCACATGTCGTACTGGAAGATGCCCCTGCTGACAGGACTGCCTTCGTACGTCTCGTAA 32778 Query 244358 GGACCGTCGCGCTGGGCCAGCTTACAGCTCTCGTCGAGGGCGGCGTAGTAGATGGTCTCG 244417 ||||| || | || ||| || | || ||| ||||||| || |||| ||||| |||||| Sbjct 32777 GGACCATCCCTCTCGGCAAGATCACTGCTGGCGTCGAGAGCAGCGTGATAGATAGTCTCG 32718 Query 244418 AAGATCATCTTGTTCATGTCGCGGGCCTTGCCGCAGGTGAAGGGGATGCCCATCATCATG 244477 |||||| |||||| | || || |||| | || ||| || | | | |||||| Sbjct 32717 AAGATCTGCTTGTTGAGGTGACGCGCCTCGGGAGAGTCGAACGGCAGCCGAAGGATCATG 32658 Query 244478 AAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATGGGTCTGTGTCGCTTGTTGGAGCGC 244537 || |||| || || || | ||| |||||||| ||||| | ||| ||| ||||||| || Sbjct 32657 AACGCGTCAGCGAGACCGTTCACACCGATGCCAATGGGACGGTGGCGCATGTTGGAACGA 32598 Query 244538 ATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGATCACCTTGTTGAGGTTG 244588 || ||||| | ||||| ||||| ||| || | |||||| | |||| Sbjct 32597 CGAGCCTCGGGAATTGGGTAGTAGTTGATGTCAATGATCTTGTTCAAGTTG 32547 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944217037920240